Gene info for mRNA_1484 in Rhodosporidium toruloides IFO0880

Name: 9852
Annotation: HMMPfam-Cation efflux family-PF01545,SUPERFAMILY--SSF161111
Type 1: Protein-coding gene
Located on scaffold scaffold_11, - strand, nucleotides 410,749 to 412,587
See nucleotide sequence around mRNA_1484 or for all of scaffold scaffold_11

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 9847 and 9848 are separated by 1123 nucleotides9848 and 9849 are separated by 126 nucleotides9849 and 9850 are separated by 4139 nucleotides9850 and 9851 are separated by 278 nucleotides9851 and 9852 are separated by 349 nucleotides9852 and 9853 are separated by 284 nucleotides9853 and 9854 are separated by 84 nucleotides9854 and 9855 are separated by 641 nucleotides9855 and 9856 are separated by 258 nucleotides9856 and 9857 are separated by 572 nucleotides mRNA_1479: 9847 - ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 401,327 to 402,379 9847 mRNA_1480: 9848 - KOG0254 Predicted transporter (major facilitator superfamily), at 403,503 to 404,169 9848 mRNA_1481: 9849 - Hypothetical Protein, at 404,296 to 404,872 9849 mRNA_1482: 9850 - BLAST zn -c6 transcription factor [Malassezia pachyderm..., at 409,012 to 409,512 9850 mRNA_1483: 9851 - BLAST Protein priB [Grifola frondosa], at 409,791 to 410,399 9851 mRNA_1484: 9852 - HMMPfam-Cation efflux family-PF01545,SUPERFAMILY--SSF161111, at 410,749 to 412,587 9852 mRNA_1485: 9853 - HMMPfam-WW domain-PF00397,ProSitePatterns-WW/rsp5/WWP domain signature.-PS01159,ProSiteProfiles-WW/rsp5/WWP domain profile.-PS50020,SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045, at 412,872 to 413,936 9853 mRNA_1486: 9854 - K11085 msbA ATP-binding cassette, subfamily B, bacterial MsbA, at 414,021 to 419,409 9854 mRNA_1487: 9855 - K01883 CARS, cysS cysteinyl-tRNA synthetase, at 420,051 to 423,071 9855 mRNA_1488: 9856 - K15371 GDH2 glutamate dehydrogenase, at 423,330 to 427,670 9856 mRNA_1489: 9857 - K09022 ridA, tdcF 2-iminobutanoate/2-iminopropanoate deaminase, at 428,243 to 429,095 9857
Locus Name Description Strand Phenotype
mRNA_1479 9847 ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098 + insig.
mRNA_1480 9848 KOG0254 Predicted transporter (major facilitator superfamily) + cofit
mRNA_1481 9849 Hypothetical Protein - no data
mRNA_1482 9850 BLAST zn -c6 transcription factor [Malassezia pachyderm... + cofit
mRNA_1483 9851 BLAST Protein priB [Grifola frondosa] + cofit
mRNA_1484 9852 HMMPfam-Cation efflux family-PF01545,SUPERFAMILY--SSF161111 - cofit
mRNA_1485 9853 HMMPfam-WW domain-PF00397,ProSitePatterns-WW/rsp5/WWP domain signature.-PS01159,ProSiteProfiles-WW/rsp5/WWP domain profile.-PS50020,SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045 + cofit
mRNA_1486 9854 K11085 msbA ATP-binding cassette, subfamily B, bacterial MsbA - cofit
mRNA_1487 9855 K01883 CARS, cysS cysteinyl-tRNA synthetase + cofit
mRNA_1488 9856 K15371 GDH2 glutamate dehydrogenase - cofit
mRNA_1489 9857 K09022 ridA, tdcF 2-iminobutanoate/2-iminopropanoate deaminase - cofit

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