Gene info for mRNA_1489 in Rhodosporidium toruloides IFO0880

Name: 9857
Annotation: K09022 ridA, tdcF 2-iminobutanoate/2-iminopropanoate deaminase
Type 1: Protein-coding gene
Located on scaffold scaffold_11, - strand, nucleotides 428,243 to 429,095
See nucleotide sequence around mRNA_1489 or for all of scaffold scaffold_11

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 9852 and 9853 are separated by 284 nucleotides9853 and 9854 are separated by 84 nucleotides9854 and 9855 are separated by 641 nucleotides9855 and 9856 are separated by 258 nucleotides9856 and 9857 are separated by 572 nucleotides9857 and 9858 are separated by 416 nucleotides9858 and 9859 are separated by 1476 nucleotides9859 and 9860 are separated by 769 nucleotides9860 and 9861 are separated by 137 nucleotides9861 and 9862 are separated by 2175 nucleotides mRNA_1484: 9852 - HMMPfam-Cation efflux family-PF01545,SUPERFAMILY--SSF161111, at 410,749 to 412,587 9852 mRNA_1485: 9853 - HMMPfam-WW domain-PF00397,ProSitePatterns-WW/rsp5/WWP domain signature.-PS01159,ProSiteProfiles-WW/rsp5/WWP domain profile.-PS50020,SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045, at 412,872 to 413,936 9853 mRNA_1486: 9854 - K11085 msbA ATP-binding cassette, subfamily B, bacterial MsbA, at 414,021 to 419,409 9854 mRNA_1487: 9855 - K01883 CARS, cysS cysteinyl-tRNA synthetase, at 420,051 to 423,071 9855 mRNA_1488: 9856 - K15371 GDH2 glutamate dehydrogenase, at 423,330 to 427,670 9856 mRNA_1489: 9857 - K09022 ridA, tdcF 2-iminobutanoate/2-iminopropanoate deaminase, at 428,243 to 429,095 9857 mRNA_1490: 9858 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 429,512 to 431,122 9858 mRNA_1491: 9859 - K04513 RHOA Ras homolog gene family, member A, at 432,599 to 433,571 9859 mRNA_1492: 9860 - K12855 PRPF6, PRP6 pre-mRNA-processing factor 6, at 434,341 to 437,683 9860 mRNA_1493: 9861 - KOG1981 SOK1 kinase belonging to the STE20/SPS1/GC kinase family, at 437,821 to 440,939 9861 mRNA_1494: 9862 - HMMPfam-Haloacid dehalogenase-like hydrolase-PF13419,SUPERFAMILY--SSF56784, at 443,115 to 444,117 9862
Locus Name Description Strand Phenotype
mRNA_1484 9852 HMMPfam-Cation efflux family-PF01545,SUPERFAMILY--SSF161111 - cofit
mRNA_1485 9853 HMMPfam-WW domain-PF00397,ProSitePatterns-WW/rsp5/WWP domain signature.-PS01159,ProSiteProfiles-WW/rsp5/WWP domain profile.-PS50020,SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045 + cofit
mRNA_1486 9854 K11085 msbA ATP-binding cassette, subfamily B, bacterial MsbA - cofit
mRNA_1487 9855 K01883 CARS, cysS cysteinyl-tRNA synthetase + cofit
mRNA_1488 9856 K15371 GDH2 glutamate dehydrogenase - cofit
mRNA_1489 9857 K09022 ridA, tdcF 2-iminobutanoate/2-iminopropanoate deaminase - cofit
mRNA_1490 9858 ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701 - cofit
mRNA_1491 9859 K04513 RHOA Ras homolog gene family, member A + no data
mRNA_1492 9860 K12855 PRPF6, PRP6 pre-mRNA-processing factor 6 + no data
mRNA_1493 9861 KOG1981 SOK1 kinase belonging to the STE20/SPS1/GC kinase family - cofit
mRNA_1494 9862 HMMPfam-Haloacid dehalogenase-like hydrolase-PF13419,SUPERFAMILY--SSF56784 + cofit

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