Gene info for mRNA_1596 in Rhodosporidium toruloides IFO0880

Name: 9964
Annotation: K14557 UTP6 U3 small nucleolar RNA-associated protein 6
Type 1: Protein-coding gene
Located on scaffold scaffold_11, + strand, nucleotides 686,125 to 688,577
See nucleotide sequence around mRNA_1596 or for all of scaffold scaffold_11

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 9959 and 9960 are separated by 550 nucleotides9960 and 9961 are separated by 1031 nucleotides9961 and 9962 are separated by 1221 nucleotides9962 and 9963 are separated by 308 nucleotides9963 and 9964 are separated by 380 nucleotides9964 and 9965 are separated by 89 nucleotides9965 and 9966 are separated by 267 nucleotides9966 and 9967 are separated by 407 nucleotides9967 and 9968 are separated by 498 nucleotides9968 and 9969 are separated by 346 nucleotides mRNA_1591: 9959 - K01835 pgm phosphoglucomutase, at 673,406 to 675,711 9959 mRNA_1592: 9960 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 676,262 to 677,615 9960 mRNA_1593: 9961 - KOG4366 Predicted thioesterase, at 678,647 to 679,781 9961 mRNA_1594: 9962 - K16261 YAT yeast amino acid transporter, at 681,003 to 683,049 9962 mRNA_1595: 9963 - K13342 PEX5, PXR1 peroxin-5, at 683,358 to 685,744 9963 mRNA_1596: 9964 - K14557 UTP6 U3 small nucleolar RNA-associated protein 6, at 686,125 to 688,577 9964 mRNA_1597: 9965 - Hypothetical Protein, at 688,667 to 689,443 9965 mRNA_1598: 9966 - Hypothetical Protein, at 689,711 to 690,052 9966 mRNA_1599: 9967 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 690,460 to 691,819 9967 mRNA_1600: 9968 - K12178 COPS4, CSN4 COP9 signalosome complex subunit 4, at 692,318 to 693,945 9968 mRNA_1601: 9969 - HMMPfam-Protein of unknown function (DUF1682)-PF07946,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 694,292 to 695,992 9969
Locus Name Description Strand Phenotype
mRNA_1591 9959 K01835 pgm phosphoglucomutase + insig.
mRNA_1592 9960 HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 + cofit
mRNA_1593 9961 KOG4366 Predicted thioesterase + cofit
mRNA_1594 9962 K16261 YAT yeast amino acid transporter + cofit
mRNA_1595 9963 K13342 PEX5, PXR1 peroxin-5 - no data
mRNA_1596 9964 K14557 UTP6 U3 small nucleolar RNA-associated protein 6 + cofit
mRNA_1597 9965 Hypothetical Protein - no data
mRNA_1598 9966 Hypothetical Protein - no data
mRNA_1599 9967 HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 - cofit
mRNA_1600 9968 K12178 COPS4, CSN4 COP9 signalosome complex subunit 4 - cofit
mRNA_1601 9969 HMMPfam-Protein of unknown function (DUF1682)-PF07946,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257 - cofit

Or browse nearby genes

Or see the comparative fitness browser