Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
9998 and 9999 are separated by 357 nucleotides
9999 and 10000 are separated by 1563 nucleotides
10000 and 10001 are separated by 740 nucleotides
10001 and 10002 are separated by 179 nucleotides
mRNA_1630: 9998 - SUPERFAMILY--SSF81383, at 756,759 to 757,602
9998
mRNA_1631: 9999 - BLAST Tyrosine-protein phosphatase non-receptor type 23 [St..., at 757,960 to 758,498
9999
mRNA_1632: 10000 - K00036 G6PD, zwf glucose-6-phosphate 1-dehydrogenase, at 760,062 to 761,705
10000
mRNA_1633: 10001 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 762,446 to 764,135
10001
mRNA_1634: 10002 - HMMPfam-alpha/beta hydrolase fold-PF07859,ProSitePatterns-Lipolytic enzymes G-D-X-G family, putative serine active site.-PS01174,SUPERFAMILY--SSF53474, at 764,315 to 766,210
10002
Group
Condition
mRNA
_1630
mRNA
_1631
mRNA
_1632
mRNA
_1633
mRNA
_1634
9998
9999
10000
10001
10002
growth on oleic acid
YNB Oleic Acid
+0.3
-0.4
N.D.
-0.8
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-0.6
N.D.
-0.5
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.3
N.D.
-0.4
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.3
N.D.
-0.7
-0.0
growth on ricinoleic acid
YNB Glucose
+0.1
-0.4
N.D.
-0.6
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
-0.3
N.D.
-0.1
+0.5
growth on ypd
YPD
+0.5
+0.2
N.D.
-0.7
-0.4
auxotrophy
Dropout Complete
-0.0
+0.1
N.D.
-0.4
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
+0.1
N.D.
-0.3
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.2
N.D.
-0.6
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.0
N.D.
+0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.3
+0.2
N.D.
+0.0
-0.5
growth on oleic acid
YNB Glucose
+0.7
+0.1
N.D.
-0.7
-0.0
auxotrophy
YNB Glucose
+0.4
-0.1
N.D.
-0.2
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.4
N.D.
+0.6
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
+0.1
N.D.
+1.5
-1.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.1
N.D.
+0.5
+0.0
ypd buoyancy
40 hrs Low Buoyancy
+1.0
+0.2
N.D.
+0.2
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.7
+0.3
N.D.
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.6
N.D.
+0.7
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.8
+0.5
N.D.
+0.5
-0.1
remove
mRNA_1630
plot
remove
mRNA_1631
plot
remove
mRNA_1632
remove
mRNA_1633
plot
remove
mRNA_1634
plot