Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10012 and 10013 are separated by 176 nucleotides10013 and 10014 are separated by 334 nucleotides10014 and 10015 are separated by 2003 nucleotides10015 and 10016 are separated by 461 nucleotides mRNA_1644: 10012 - K00253 IVD, ivd isovaleryl-CoA dehydrogenase, at 792,797 to 794,915 10012 mRNA_1645: 10013 - Hypothetical Protein, at 795,092 to 795,670 10013 mRNA_1646: 10014 - KOG2182 Hydrolytic enzymes of the alpha/beta hydrolase fold, at 796,005 to 798,167 10014 mRNA_1647: 10015 - K02930 RP-L4e, RPL4 large subunit ribosomal protein L4e, at 800,171 to 801,820 10015 mRNA_1648: 10016 - K11436 PRMT3 type I protein arginine methyltransferase, at 802,282 to 804,374 10016
Group Condition mRNA_1644 mRNA_1645 mRNA_1646 mRNA_1647 mRNA_1648
10012 10013 10014 10015 10016
auxotrophy YNB Glucose 75mM Arginine -0.6 N.D. -0.6 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.5 N.D. -0.4 N.D. N.D.
auxotrophy Dropout Complete -0.6 N.D. -0.3 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.2 N.D. -0.5 N.D. N.D.
growth on ypd YPD -0.6 N.D. -0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. -0.3 N.D. N.D.
auxotrophy YNB Glucose -0.4 N.D. -0.1 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. -0.5 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. -0.2 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. -0.2 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.1 N.D. N.D.
growth on oleic acid YNB Glucose -0.0 N.D. -0.2 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. -0.4 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. -0.2 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 N.D. +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. +0.2 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. +0.1 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.4 N.D. +0.1 N.D. N.D.
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