Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10017 and 10018 are separated by 886 nucleotides10018 and 10019 are separated by 193 nucleotides10019 and 10020 are separated by 567 nucleotides10020 and 10021 are separated by 915 nucleotides mRNA_1649: 10017 - KOG2495 NADH-dehydrogenase (ubiquinone), at 804,506 to 806,689 10017 mRNA_1650: 10018 - KOG0254 Predicted transporter (major facilitator superfamily), at 807,576 to 811,155 10018 mRNA_1651: 10019 - SUPERFAMILY--SSF69047, at 811,349 to 811,874 10019 mRNA_1652: 10020 - Hypothetical Protein, at 812,442 to 813,114 10020 mRNA_1653: 10021 - Hypothetical Protein, at 814,030 to 815,626 10021
Group Condition mRNA_1649 mRNA_1650 mRNA_1651 mRNA_1652 mRNA_1653
10017 10018 10019 10020 10021
growth on ypd YPD -0.3 -0.4 -0.0 -0.6 +0.1
auxotrophy Dropout Complete +0.1 -0.8 +0.0 -0.2 -0.2
auxotrophy YNB Glucose +0.1 -0.6 +0.0 -0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.0 +0.4 -0.5 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.7 +0.1 -0.1 -0.3
growth on oleic acid YNB Oleic Acid +0.4 -0.5 +0.2 -0.6 -0.0
growth on ricinoleic acid YNB Glucose +0.3 -0.7 +0.3 -0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.7 +0.0 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 -1.0 +0.4 -0.2 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.3 +0.1 -0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.1 +0.0 -0.8 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 +0.1 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 -0.4 +0.0 -0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.2 +0.3 -0.4 +0.0
growth on oleic acid YNB Glucose +0.4 -0.2 +0.2 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 -0.2 -0.1 -0.3 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.1 +0.2 -0.5 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 -0.1 -0.0 -0.4 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 +0.4 +0.1 -0.6 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.3 +0.1 +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.2 -0.0 +0.5 +0.5
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