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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10032 and 10033 are separated by 21 nucleotides
10033 and 10034 are separated by 293 nucleotides
10034 and 10035 are separated by 379 nucleotides
10035 and 10036 are separated by 957 nucleotides
mRNA_1664: 10032 - Hypothetical Protein, at 839,367 to 840,051
10032
mRNA_1665: 10033 - K03358 APC11 anaphase-promoting complex subunit 11, at 840,073 to 840,626
10033
mRNA_1666: 10034 - HMMPfam-Nucleolar protein 12 (25kDa)-PF09805, at 840,920 to 841,915
10034
mRNA_1667: 10035 - K11527 K11527 two-component system, sensor histidine kinase and response regulator, at 842,295 to 847,609
10035
mRNA_1668: 10036 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 848,567 to 849,208
10036
Group
Condition
mRNA
_1664
mRNA
_1665
mRNA
_1666
mRNA
_1667
mRNA
_1668
10032
10033
10034
10035
10036
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.8
N.D.
+0.2
-1.2
auxotrophy
Dropout Complete
-0.0
-0.1
N.D.
-0.2
-0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.6
N.D.
+0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.1
N.D.
+0.2
-0.8
growth on ricinoleic acid
YNB Glucose
-0.1
-0.3
N.D.
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.3
N.D.
-0.2
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.0
N.D.
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.1
N.D.
-0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.6
N.D.
+0.2
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.7
N.D.
-0.2
-0.3
growth on oleic acid
YNB Glucose
-0.1
-0.1
N.D.
+0.2
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.1
N.D.
+0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.5
+0.5
N.D.
+0.1
+0.2
growth on oleic acid
YNB Oleic Acid
+0.0
+0.2
N.D.
-0.2
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
+0.7
N.D.
+0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.3
+0.2
N.D.
-0.0
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.6
N.D.
-0.3
+0.3
auxotrophy
YNB Glucose
-0.0
+0.3
N.D.
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.4
N.D.
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.5
N.D.
+0.1
+0.4
growth on ypd
YPD
+0.1
+0.8
N.D.
-0.1
+0.9
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