Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10038 and 10039 are separated by 708 nucleotides10039 and 10040 are separated by 620 nucleotides10040 and 10041 are separated by 235 nucleotides10041 and 10042 are separated by 1450 nucleotides mRNA_1670: 10038 - K15918 GLYK D-glycerate 3-kinase, at 851,334 to 852,644 10038 mRNA_1671: 10039 - K13344 PEX13 peroxin-13, at 853,353 to 854,767 10039 mRNA_1672: 10040 - K00382 DLD, lpd, pdhD dihydrolipoamide dehydrogenase, at 855,388 to 857,888 10040 mRNA_1673: 10041 - Hypothetical Protein, at 858,124 to 858,750 10041 mRNA_1674: 10042 - K07297 ADIPOR adiponectin receptor, at 860,201 to 862,501 10042
Group Condition mRNA_1670 mRNA_1671 mRNA_1672 mRNA_1673 mRNA_1674
10038 10039 10040 10041 10042
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 N.D. N.D. -0.1 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. N.D. -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. N.D. -0.4 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 N.D. N.D. -0.3 -0.3
growth on oleic acid YNB Glucose -0.5 N.D. N.D. -0.0 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. N.D. -0.4 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. N.D. -0.1 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 N.D. N.D. +0.3 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. N.D. +0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 N.D. N.D. +0.1 +0.4
growth on ypd YPD -0.0 N.D. N.D. -0.1 +0.5
growth on oleic acid YNB Oleic Acid -0.4 N.D. N.D. +0.4 +0.5
ypd buoyancy 40 hrs High Buoyancy +0.4 N.D. N.D. +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 N.D. N.D. +0.0 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 N.D. N.D. -0.1 +0.5
growth on ricinoleic acid YNB Glucose +0.0 N.D. N.D. +0.4 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. N.D. +0.3 +0.6
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. N.D. +0.1 +0.8
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. N.D. +0.5 +0.7
auxotrophy YNB Glucose -0.0 N.D. N.D. +0.8 +0.5
auxotrophy Dropout Complete -0.1 N.D. N.D. +0.8 +0.8
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