Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10042 and 10043 are separated by 549 nucleotides10043 and 10044 are separated by 857 nucleotides10044 and 10045 are separated by 2080 nucleotides10045 and 10046 are separated by 133 nucleotides mRNA_1674: 10042 - K07297 ADIPOR adiponectin receptor, at 860,201 to 862,501 10042 mRNA_1675: 10043 - K01424 E3.5.1.1, ansA, ansB L-asparaginase, at 863,051 to 864,755 10043 mRNA_1676: 10044 - SUPERFAMILY--SSF81383, at 865,613 to 866,688 10044 mRNA_1677: 10045 - K15620 GOLPH3, GPP34 golgi phosphoprotein 3, at 868,769 to 870,335 10045 mRNA_1678: 10046 - K09498 CCT6 T-complex protein 1 subunit zeta, at 870,469 to 873,019 10046
Group Condition mRNA_1674 mRNA_1675 mRNA_1676 mRNA_1677 mRNA_1678
10042 10043 10044 10045 10046
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.1 -0.9 -2.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.1 +0.0 -1.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.2 -0.2 -0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.1 -0.4 -0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.3 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.2 -0.2 +0.2 N.D.
growth on ypd YPD +0.5 -0.1 -0.3 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.0 -0.6 +0.6 N.D.
growth on oleic acid YNB Oleic Acid +0.5 -0.3 -0.9 +1.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.2 -0.2 +0.7 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 +0.0 +0.7 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 +0.2 -0.4 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.4 +0.1 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.5 -1.1 +2.6 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.7 +0.0 -0.2 +0.8 N.D.
growth on oleic acid YNB Glucose +0.5 -0.2 -0.1 +1.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.4 -1.6 +3.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.8 -0.2 -0.0 +1.0 N.D.
auxotrophy YNB Glucose +0.5 +0.1 +0.1 +1.2 N.D.
growth on ricinoleic acid YNB Glucose +0.4 -0.5 +0.1 +1.9 N.D.
auxotrophy Dropout Complete +0.8 +0.2 +0.1 +1.1 N.D.
remove
mRNA_1674
plot
remove
mRNA_1675
plot
remove
mRNA_1676
remove
mRNA_1677
plot
remove
mRNA_1678
plot