Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10044 and 10045 are separated by 2080 nucleotides10045 and 10046 are separated by 133 nucleotides10046 and 10047 are separated by 89 nucleotides10047 and 10048 are separated by 676 nucleotides mRNA_1676: 10044 - SUPERFAMILY--SSF81383, at 865,613 to 866,688 10044 mRNA_1677: 10045 - K15620 GOLPH3, GPP34 golgi phosphoprotein 3, at 868,769 to 870,335 10045 mRNA_1678: 10046 - K09498 CCT6 T-complex protein 1 subunit zeta, at 870,469 to 873,019 10046 mRNA_1679: 10047 - BLAST cyclin-like F-box domain containing protein [Rhod..., at 873,109 to 875,707 10047 mRNA_1680: 10048 - BLAST cyclin-like F-box domain containing protein [Rhod..., at 876,384 to 878,826 10048
Group Condition mRNA_1676 mRNA_1677 mRNA_1678 mRNA_1679 mRNA_1680
10044 10045 10046 10047 10048
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -2.6 N.D. -0.4 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -1.2 N.D. -0.7 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.4 N.D. -0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.4 N.D. +0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.1 N.D. +0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.2 N.D. -0.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.5 N.D. +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 +0.6 N.D. -0.2 +0.3
growth on oleic acid YNB Oleic Acid -0.9 +1.0 N.D. +0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 N.D. -0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.7 N.D. -0.3 +0.0
growth on ypd YPD -0.3 +0.0 N.D. +0.5 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.8 N.D. +0.3 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.7 N.D. +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 +1.0 N.D. +0.3 -0.1
growth on oleic acid YNB Glucose -0.1 +1.2 N.D. +0.0 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -1.6 +3.0 N.D. +0.5 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -1.1 +2.6 N.D. +0.4 -0.6
auxotrophy YNB Glucose +0.1 +1.2 N.D. +0.4 +0.1
growth on ricinoleic acid YNB Glucose +0.1 +1.9 N.D. +0.5 -0.6
auxotrophy Dropout Complete +0.1 +1.1 N.D. +0.5 +0.2
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