Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10054 and 10055 are separated by 789 nucleotides
10055 and 10056 are separated by 4036 nucleotides
10056 and 10057 are separated by 307 nucleotides
10057 and 10058 are separated by 321 nucleotides
mRNA_1686: 10054 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 887,231 to 890,283
10054
mRNA_1687: 10055 - K02969 RP-S20e, RPS20 small subunit ribosomal protein S20e, at 891,073 to 891,798
10055
mRNA_1688: 10056 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 895,835 to 896,742
10056
mRNA_1689: 10057 - KOG1286 Amino acid transporters, at 897,050 to 899,959
10057
mRNA_1690: 10058 - BLAST putative transmembrane protein [Rhizoctonia solani 123E], at 900,281 to 902,715
10058
Group
Condition
mRNA
_1686
mRNA
_1687
mRNA
_1688
mRNA
_1689
mRNA
_1690
10054
10055
10056
10057
10058
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.0
N.D.
N.D.
-0.0
-2.2
ypd buoyancy
40 hrs No Buoyancy Separation
-2.5
N.D.
N.D.
-0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
N.D.
N.D.
-0.1
-1.7
ypd buoyancy
40 hrs Low Buoyancy
-1.7
N.D.
N.D.
+0.0
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
N.D.
N.D.
-0.1
-2.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.0
N.D.
N.D.
-0.1
+0.2
growth on ricinoleic acid
YNB Glucose
-0.9
N.D.
N.D.
-0.0
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.3
N.D.
N.D.
+0.2
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.3
N.D.
N.D.
+0.0
-0.2
growth on ypd
YPD
-0.7
N.D.
N.D.
+0.1
+0.2
growth on oleic acid
YNB Glucose
-0.3
N.D.
N.D.
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
N.D.
N.D.
+0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
N.D.
+0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
N.D.
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
N.D.
N.D.
+0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
N.D.
N.D.
-0.1
+0.6
auxotrophy
Dropout Complete
+0.8
N.D.
N.D.
+0.1
-0.2
auxotrophy
YNB Glucose
+0.9
N.D.
N.D.
+0.2
-0.2
growth on oleic acid
YNB Oleic Acid
+0.9
N.D.
N.D.
+0.0
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.7
N.D.
N.D.
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+2.0
N.D.
N.D.
+0.1
-0.2
remove
mRNA_1686
plot
remove
mRNA_1687
plot
remove
mRNA_1688
remove
mRNA_1689
plot
remove
mRNA_1690
plot