Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10055 and 10056 are separated by 4036 nucleotides
10056 and 10057 are separated by 307 nucleotides
10057 and 10058 are separated by 321 nucleotides
10058 and 10059 are separated by 2074 nucleotides
mRNA_1687: 10055 - K02969 RP-S20e, RPS20 small subunit ribosomal protein S20e, at 891,073 to 891,798
10055
mRNA_1688: 10056 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 895,835 to 896,742
10056
mRNA_1689: 10057 - KOG1286 Amino acid transporters, at 897,050 to 899,959
10057
mRNA_1690: 10058 - BLAST putative transmembrane protein [Rhizoctonia solani 123E], at 900,281 to 902,715
10058
mRNA_1691: 10059 - K16261 YAT yeast amino acid transporter, at 904,790 to 907,091
10059
Group
Condition
mRNA
_1687
mRNA
_1688
mRNA
_1689
mRNA
_1690
mRNA
_1691
10055
10056
10057
10058
10059
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
-0.1
-2.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
-0.0
-2.2
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-0.1
-1.7
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.1
-0.3
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
-0.1
+0.2
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
+0.1
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
+0.2
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+0.0
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
+0.0
-0.2
+0.1
auxotrophy
Dropout Complete
N.D.
N.D.
+0.1
-0.2
-0.1
growth on oleic acid
YNB Glucose
N.D.
N.D.
+0.1
+0.0
-0.2
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
+0.0
+0.2
-0.2
auxotrophy
YNB Glucose
N.D.
N.D.
+0.2
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
+0.0
-0.0
+0.0
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
-0.0
+0.2
-0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.2
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.2
-0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.2
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
+0.1
-0.1
+0.2
growth on ypd
YPD
N.D.
N.D.
+0.1
+0.2
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
-0.1
+0.6
-0.2
remove
mRNA_1687
plot
remove
mRNA_1688
plot
remove
mRNA_1689
remove
mRNA_1690
plot
remove
mRNA_1691
plot