Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10059 and 10060 are separated by 1052 nucleotides10060 and 10061 are separated by 259 nucleotides10061 and 10062 are separated by 393 nucleotides10062 and 10063 are separated by 632 nucleotides mRNA_1691: 10059 - K16261 YAT yeast amino acid transporter, at 904,790 to 907,091 10059 mRNA_1692: 10060 - K20292 COG5 conserved oligomeric Golgi complex subunit 5, at 908,144 to 911,524 10060 mRNA_1693: 10061 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 911,784 to 914,454 10061 mRNA_1694: 10062 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 914,848 to 915,614 10062 mRNA_1695: 10063 - BLAST cyclin-like F-box domain containing protein [Rhod..., at 916,247 to 917,394 10063
Group Condition mRNA_1691 mRNA_1692 mRNA_1693 mRNA_1694 mRNA_1695
10059 10060 10061 10062 10063
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.7 +0.2 -0.5 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.3 -0.2 -0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.3 -0.0 -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.2 +0.2 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.2 -0.0 -0.0 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.4 -0.1 +0.2 +0.2
growth on ypd YPD +0.0 -0.1 +0.1 -0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 +0.1 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 -0.2 +0.2 +0.3
growth on oleic acid YNB Glucose -0.2 +0.6 -0.2 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.2 +0.1 +0.1 +0.0
auxotrophy YNB Glucose -0.1 +0.3 +0.1 +0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.2 +0.1 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.2 +0.1 -0.0 +0.3
growth on oleic acid YNB Oleic Acid -0.2 +0.7 -0.1 -0.0 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.5 +0.0 -0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.4 +0.2 +0.2 +0.1
auxotrophy Dropout Complete -0.1 +0.8 +0.2 +0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.7 +0.1 +0.6 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +1.1 +0.2 +0.4 -0.2
growth on ricinoleic acid YNB Glucose -0.0 +0.4 +0.2 +0.7 -0.0
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