Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10064 and 10065 are separated by 402 nucleotides10065 and 10066 are separated by 345 nucleotides10066 and 10067 are separated by 252 nucleotides10067 and 10068 are separated by 258 nucleotides mRNA_1696: 10064 - BLAST membrane-associating domain protein [Rhizoctonia sola..., at 917,668 to 919,209 10064 mRNA_1697: 10065 - BLAST Pro41 protein, putative [Rhizoctonia solani AG-3 Rhs1AP], at 919,612 to 920,343 10065 mRNA_1698: 10066 - K11493 RCC1 regulator of chromosome condensation, at 920,689 to 923,433 10066 mRNA_1699: 10067 - K10751 CHAF1B chromatin assembly factor 1 subunit B, at 923,686 to 926,901 10067 mRNA_1700: 10068 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 927,160 to 928,283 10068
Group Condition mRNA_1696 mRNA_1697 mRNA_1698 mRNA_1699 mRNA_1700
10064 10065 10066 10067 10068
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.4 N.D. -1.5 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 N.D. -1.5 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.6 N.D. -2.0 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.6 -0.3 N.D. -0.5 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.2 N.D. -0.1 -0.4
auxotrophy YNB Glucose -0.5 +0.0 N.D. -0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.1 N.D. -1.7 +0.6
growth on ypd YPD -0.6 -0.3 N.D. +0.5 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.3 N.D. -0.6 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.2 N.D. -0.3 -0.1
auxotrophy Dropout Complete -0.3 +0.3 N.D. +0.1 -0.1
growth on ricinoleic acid YNB Glucose +0.1 +0.1 N.D. -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.1 N.D. +0.5 +0.0
growth on oleic acid YNB Glucose -0.3 +0.2 N.D. +0.5 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.0 N.D. +1.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.9 N.D. +0.2 +0.2
growth on oleic acid YNB Oleic Acid -0.2 +0.1 N.D. +1.4 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.2 N.D. +0.9 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +1.3 N.D. +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +1.1 N.D. +0.9 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +1.2 N.D. +0.7 -0.0
remove
mRNA_1696
plot
remove
mRNA_1697
plot
remove
mRNA_1698
remove
mRNA_1699
plot
remove
mRNA_1700
plot