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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10067 and 10068 are separated by 258 nucleotides
10068 and 10069 are separated by 293 nucleotides
10069 and 10070 are separated by 428 nucleotides
10070 and 10071 are separated by 1993 nucleotides
mRNA_1699: 10067 - K10751 CHAF1B chromatin assembly factor 1 subunit B, at 923,686 to 926,901
10067
mRNA_1700: 10068 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 927,160 to 928,283
10068
mRNA_1701: 10069 - K03522 fixB, etfA electron transfer flavoprotein alpha subunit, at 928,577 to 930,398
10069
mRNA_1702: 10070 - Hypothetical Protein, at 930,827 to 931,156
10070
mRNA_1703: 10071 - SUPERFAMILY--SSF49764, at 933,150 to 935,625
10071
Group
Condition
mRNA
_1699
mRNA
_1700
mRNA
_1701
mRNA
_1702
mRNA
_1703
10067
10068
10069
10070
10071
facs on lipid accumulation
Sorted No BODIPY Gate
-1.5
+0.0
-1.7
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-1.5
+0.2
-1.3
-0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.0
+0.2
-0.9
+0.1
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-1.7
+0.6
-2.0
+0.9
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.0
+0.2
-2.8
-0.0
-0.1
auxotrophy
YNB Glucose
-0.2
-0.2
-0.9
-0.4
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.6
+0.1
-0.6
-0.5
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.5
-0.1
-0.5
-0.4
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.4
-0.7
-0.2
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.9
+0.2
-1.9
-0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.1
-0.7
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
-0.1
+0.0
-0.8
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.5
+0.0
-1.0
-0.1
-0.0
growth on ricinoleic acid
YNB Glucose
-0.1
+0.2
-0.5
-0.0
-0.2
growth on oleic acid
YNB Oleic Acid
+1.4
+0.3
-1.9
-0.2
-0.2
auxotrophy
Dropout Complete
+0.1
-0.1
+0.6
-0.9
+0.2
growth on oleic acid
YNB Glucose
+0.5
-0.0
-0.6
+0.4
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.9
+0.2
-1.0
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.2
+0.0
+0.1
+0.1
growth on ypd
YPD
+0.5
-0.1
-0.4
+0.7
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.7
-0.0
+0.1
-0.1
+0.2
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