Fitness for 3 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10074 and 10075 overlap by 4 nucleotides10075 and 10076 are separated by 1019 nucleotides mRNA_1706: 10074 - K08286 E2.7.11.- protein-serine/threonine kinase, at 343 to 1,191 10074 mRNA_1707: 10075 - BLAST related to SNF1-related protein kinase KIN10 [Melanop..., at 1,188 to 2,835 10075 mRNA_1708: 10076 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 3,855 to 4,476 10076
Group Condition mRNA_1706 mRNA_1707 mRNA_1708
10074 10075 10076
ypd buoyancy 40 hrs Low Buoyancy -0.7 -0.5 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.8 -0.5 +0.2
growth on ricinoleic acid YNB Glucose -0.3 +0.2 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2 +0.2
growth on ypd YPD -0.1 +0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.1 -0.4
growth on oleic acid YNB Glucose +0.1 +0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.3 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.2 +0.3
auxotrophy Dropout Complete -0.3 +0.0 +0.5
growth on oleic acid YNB Oleic Acid -0.2 +0.2 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.1 -0.2
auxotrophy YNB Glucose +0.1 +0.3 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.3 +0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.5 +0.3 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.5 +0.8
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.5 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.7 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 +1.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 +0.9 +0.1
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