Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10074 and 10075 overlap by 4 nucleotides
10075 and 10076 are separated by 1019 nucleotides
10076 and 10077 are separated by 551 nucleotides
10077 and 10078 are separated by 560 nucleotides
mRNA_1706: 10074 - K08286 E2.7.11.- protein-serine/threonine kinase, at 343 to 1,191
10074
mRNA_1707: 10075 - BLAST related to SNF1-related protein kinase KIN10 [Melanop..., at 1,188 to 2,835
10075
mRNA_1708: 10076 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 3,855 to 4,476
10076
mRNA_1709: 10077 - K16302 CNNM metal transporter CNNM, at 5,028 to 7,438
10077
mRNA_1710: 10078 - Hypothetical Protein, at 7,999 to 8,750
10078
Group
Condition
mRNA
_1706
mRNA
_1707
mRNA
_1708
mRNA
_1709
mRNA
_1710
10074
10075
10076
10077
10078
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.8
-0.5
+0.2
-0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.7
-0.5
-0.3
-0.2
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.3
-0.4
+0.0
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.2
-0.0
+0.1
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.4
+0.1
-0.2
+0.1
-0.5
growth on ypd
YPD
-0.1
+0.1
-0.0
+0.5
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.2
+0.2
+0.3
-0.2
growth on ricinoleic acid
YNB Glucose
-0.3
+0.2
-0.5
-0.0
+0.6
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
+0.5
+0.4
-0.5
-0.9
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
+0.1
-0.4
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.2
+0.3
+0.3
+0.1
growth on oleic acid
YNB Glucose
+0.1
+0.2
-0.3
+0.0
+0.5
growth on oleic acid
YNB Oleic Acid
-0.2
+0.2
+0.3
+0.1
+0.5
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
+0.3
+0.2
-0.1
+0.0
auxotrophy
Dropout Complete
-0.3
+0.0
+0.5
-0.1
+0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.7
+0.9
+0.1
+0.2
-0.3
auxotrophy
YNB Glucose
+0.1
+0.3
+0.3
+0.0
+1.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.3
+0.6
-0.1
+1.2
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.5
+0.8
+0.0
+0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+0.7
+0.4
+0.3
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.7
+1.0
+0.1
+0.3
+0.4
remove
mRNA_1706
plot
remove
mRNA_1707
plot
remove
mRNA_1708
remove
mRNA_1709
plot
remove
mRNA_1710
plot