Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10075 and 10076 are separated by 1019 nucleotides10076 and 10077 are separated by 551 nucleotides10077 and 10078 are separated by 560 nucleotides10078 and 10079 are separated by 319 nucleotides mRNA_1707: 10075 - BLAST related to SNF1-related protein kinase KIN10 [Melanop..., at 1,188 to 2,835 10075 mRNA_1708: 10076 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 3,855 to 4,476 10076 mRNA_1709: 10077 - K16302 CNNM metal transporter CNNM, at 5,028 to 7,438 10077 mRNA_1710: 10078 - Hypothetical Protein, at 7,999 to 8,750 10078 mRNA_1711: 10079 - K01887 RARS, argS arginyl-tRNA synthetase, at 9,070 to 11,520 10079
Group Condition mRNA_1707 mRNA_1708 mRNA_1709 mRNA_1710 mRNA_1711
10075 10076 10077 10078 10079
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 +0.2 -0.1 -0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.3 -0.2 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.2 +0.1 -0.5 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.4 +0.0 -0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 +0.4 -0.5 -0.9 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.4 +0.3 -0.1 N.D.
growth on ypd YPD +0.1 -0.0 +0.5 -0.6 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.2 +0.3 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.0 +0.1 +0.3 N.D.
growth on ricinoleic acid YNB Glucose +0.2 -0.5 -0.0 +0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.2 -0.1 +0.0 N.D.
growth on oleic acid YNB Glucose +0.2 -0.3 +0.0 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.3 +0.3 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.9 +0.1 +0.2 -0.3 N.D.
growth on oleic acid YNB Oleic Acid +0.2 +0.3 +0.1 +0.5 N.D.
auxotrophy Dropout Complete +0.0 +0.5 -0.1 +0.6 N.D.
auxotrophy YNB Glucose +0.3 +0.3 +0.0 +1.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +1.0 +0.1 +0.3 +0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.7 +0.4 +0.3 +0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.6 -0.1 +1.2 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.8 +0.0 +0.7 N.D.
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