Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10076 and 10077 are separated by 551 nucleotides10077 and 10078 are separated by 560 nucleotides10078 and 10079 are separated by 319 nucleotides10079 and 10080 are separated by 494 nucleotides mRNA_1708: 10076 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 3,855 to 4,476 10076 mRNA_1709: 10077 - K16302 CNNM metal transporter CNNM, at 5,028 to 7,438 10077 mRNA_1710: 10078 - Hypothetical Protein, at 7,999 to 8,750 10078 mRNA_1711: 10079 - K01887 RARS, argS arginyl-tRNA synthetase, at 9,070 to 11,520 10079 mRNA_1712: 10080 - KOG2131 Uncharacterized conserved protein, contains JmjC domain, at 12,015 to 13,653 10080
Group Condition mRNA_1708 mRNA_1709 mRNA_1710 mRNA_1711 mRNA_1712
10076 10077 10078 10079 10080
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.5 -0.9 N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 -0.5 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.4 +0.0 -0.4 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 +0.2 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.3 -0.1 N.D. -0.1
growth on ypd YPD -0.0 +0.5 -0.6 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.2 -0.3 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.1 +0.0 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.1 -0.4 N.D. +0.4
growth on oleic acid YNB Glucose -0.3 +0.0 +0.5 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.3 -0.2 N.D. +0.2
growth on ricinoleic acid YNB Glucose -0.5 -0.0 +0.6 N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.1 +0.3 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.3 +0.1 N.D. +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.3 +0.4 N.D. +0.0
growth on oleic acid YNB Oleic Acid +0.3 +0.1 +0.5 N.D. +0.0
auxotrophy Dropout Complete +0.5 -0.1 +0.6 N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine +0.6 -0.1 +1.2 N.D. -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.3 +0.4 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine +0.8 +0.0 +0.7 N.D. -0.2
auxotrophy YNB Glucose +0.3 +0.0 +1.0 N.D. +0.0
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