Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10078 and 10079 are separated by 319 nucleotides
10079 and 10080 are separated by 494 nucleotides
10080 and 10081 are separated by 331 nucleotides
10081 and 10082 are separated by 326 nucleotides
mRNA_1710: 10078 - Hypothetical Protein, at 7,999 to 8,750
10078
mRNA_1711: 10079 - K01887 RARS, argS arginyl-tRNA synthetase, at 9,070 to 11,520
10079
mRNA_1712: 10080 - KOG2131 Uncharacterized conserved protein, contains JmjC domain, at 12,015 to 13,653
10080
mRNA_1713: 10081 - KOG0022 Alcohol dehydrogenase, class III, at 13,985 to 15,656
10081
mRNA_1714: 10082 - K01372 BLMH, pepC bleomycin hydrolase, at 15,983 to 18,222
10082
Group
Condition
mRNA
_1710
mRNA
_1711
mRNA
_1712
mRNA
_1713
mRNA
_1714
10078
10079
10080
10081
10082
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
N.D.
-0.0
-0.2
-0.3
growth on ypd
YPD
-0.6
N.D.
-0.1
-0.2
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.5
N.D.
-0.2
+0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.4
N.D.
+0.0
+0.0
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
N.D.
-0.1
+0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
N.D.
-0.1
+0.0
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
N.D.
-0.1
-0.0
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.2
N.D.
-0.1
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
N.D.
+0.4
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
N.D.
+0.2
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
N.D.
+0.0
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
N.D.
+0.2
+0.1
+0.0
growth on oleic acid
YNB Oleic Acid
+0.5
N.D.
+0.0
+0.1
+0.1
growth on oleic acid
YNB Glucose
+0.5
N.D.
+0.0
+0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
N.D.
+0.1
+0.1
+0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.7
N.D.
-0.2
+0.3
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+1.2
N.D.
-0.5
+0.3
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
N.D.
+0.0
+0.2
+0.4
auxotrophy
Dropout Complete
+0.6
N.D.
-0.0
+0.2
+0.3
auxotrophy
YNB Glucose
+1.0
N.D.
+0.0
+0.0
+0.2
growth on ricinoleic acid
YNB Glucose
+0.6
N.D.
+0.4
-0.0
+0.3
remove
mRNA_1710
plot
remove
mRNA_1711
plot
remove
mRNA_1712
remove
mRNA_1713
plot
remove
mRNA_1714
plot