Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10084 and 10085 are separated by 378 nucleotides10085 and 10086 are separated by 306 nucleotides10086 and 10087 are separated by 785 nucleotides10087 and 10088 are separated by 639 nucleotides mRNA_1716: 10084 - K14799 TSR1 pre-rRNA-processing protein TSR1, at 21,403 to 24,344 10084 mRNA_1717: 10085 - HMMPfam-Per1-like-PF04080, at 24,723 to 26,291 10085 mRNA_1718: 10086 - HMMPfam-Cytochrome C oxidase copper chaperone (COX17)-PF05051,SUPERFAMILY--SSF47072, at 26,598 to 27,052 10086 mRNA_1719: 10087 - Hypothetical Protein, at 27,838 to 28,571 10087 mRNA_1720: 10088 - HMMPfam-Zinc finger, C2H2 type-PF00096,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SUPERFAMILY--SSF57667, at 29,211 to 32,060 10088
Group Condition mRNA_1716 mRNA_1717 mRNA_1718 mRNA_1719 mRNA_1720
10084 10085 10086 10087 10088
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -2.0 N.D. +0.9 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -1.5 N.D. +0.7 -0.2
growth on ricinoleic acid YNB Glucose N.D. -1.3 N.D. +0.9 -0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.2 N.D. -0.5 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 N.D. -0.3 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 N.D. -0.4 -0.3
auxotrophy YNB Glucose N.D. -1.1 N.D. +0.5 -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. -0.8 N.D. +0.2 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 N.D. -0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 N.D. -0.0 -0.5
growth on ypd YPD N.D. -0.3 N.D. -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 N.D. -0.0 -0.4
auxotrophy Dropout Complete N.D. -0.5 N.D. +0.5 -0.1
growth on oleic acid YNB Glucose N.D. -0.9 N.D. +0.8 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 N.D. +0.4 -0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.4 N.D. -0.3 -0.2
growth on oleic acid YNB Oleic Acid N.D. -0.1 N.D. +0.3 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 N.D. +0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.4 N.D. +0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine N.D. -0.8 N.D. +0.7 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.4 N.D. +0.4 -0.3
remove
mRNA_1716
plot		 remove
mRNA_1717
plot		 remove
mRNA_1718		 remove
mRNA_1719
plot		 remove
mRNA_1720
plot