Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10085 and 10086 are separated by 306 nucleotides10086 and 10087 are separated by 785 nucleotides10087 and 10088 are separated by 639 nucleotides10088 and 10089 are separated by 367 nucleotides mRNA_1717: 10085 - HMMPfam-Per1-like-PF04080, at 24,723 to 26,291 10085 mRNA_1718: 10086 - HMMPfam-Cytochrome C oxidase copper chaperone (COX17)-PF05051,SUPERFAMILY--SSF47072, at 26,598 to 27,052 10086 mRNA_1719: 10087 - Hypothetical Protein, at 27,838 to 28,571 10087 mRNA_1720: 10088 - HMMPfam-Zinc finger, C2H2 type-PF00096,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SUPERFAMILY--SSF57667, at 29,211 to 32,060 10088 mRNA_1721: 10089 - K11483 HOS2 histone deacetylase HOS2, at 32,428 to 34,334 10089
Group Condition mRNA_1717 mRNA_1718 mRNA_1719 mRNA_1720 mRNA_1721
10085 10086 10087 10088 10089
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. +0.0 -0.1 -2.1
growth on ricinoleic acid YNB Methylricinoleic Acid -1.5 N.D. +0.7 -0.2 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid -2.0 N.D. +0.9 -0.2 -0.3
growth on ricinoleic acid YNB Glucose -1.3 N.D. +0.9 -0.5 -0.5
auxotrophy Dropout Complete -0.5 N.D. +0.5 -0.1 -1.1
facs on lipid accumulation Sorted High BODIPY Gate +0.4 N.D. +0.0 -0.3 -1.2
auxotrophy YNB Glucose -1.1 N.D. +0.5 -0.0 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. -0.5 -0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.4 N.D. -0.3 -0.2 -1.0
growth on oleic acid YNB Glucose -0.9 N.D. +0.8 -0.1 -0.7
auxotrophy YNB Glucose 75mM Arginine -0.8 N.D. +0.2 +0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. -0.4 -0.1 -0.2
growth on ypd YPD -0.3 N.D. -0.0 -0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. -0.3 -0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.8 N.D. +0.7 +0.2 -0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. -0.4 -0.3 +0.3
growth on oleic acid YNB Oleic Acid -0.1 N.D. +0.3 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. -0.0 -0.5 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. +0.4 -0.3 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. -0.0 -0.4 +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 N.D. +0.4 -0.3 +0.6
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