Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10104 and 10105 are separated by 275 nucleotides10105 and 10106 are separated by 152 nucleotides10106 and 10107 are separated by 403 nucleotides10107 and 10108 are separated by 309 nucleotides mRNA_1736: 10104 - K01593 DDC aromatic-L-amino-acid decarboxylase, at 78,147 to 80,608 10104 mRNA_1737: 10105 - KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1, at 80,884 to 82,688 10105 mRNA_1738: 10106 - Hypothetical Protein, at 82,841 to 84,052 10106 mRNA_1739: 10107 - Hypothetical Protein, at 84,456 to 87,207 10107 mRNA_1740: 10108 - K20828 ZNF143_76, STAF zinc finger protein 143/76, at 87,517 to 89,814 10108
Group Condition mRNA_1736 mRNA_1737 mRNA_1738 mRNA_1739 mRNA_1740
10104 10105 10106 10107 10108
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.3 -0.6 -1.0 -2.7
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 +0.3 -0.6 -2.7
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.1 +0.2 +0.0 -2.6
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.2 +0.1 +0.0 -1.3
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.0 -0.1 +0.1 -1.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.3 -1.1 +0.3 -0.6
growth on ypd YPD -0.0 +0.1 -0.4 -0.6 +0.1
growth on oleic acid YNB Glucose -0.0 +0.1 +0.2 -0.1 -1.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.3 -0.4 -0.1 +0.1
auxotrophy YNB Glucose +0.1 +0.1 +0.0 +0.1 -1.0
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 -0.4 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.4 -0.6 +0.3 +0.2
growth on ricinoleic acid YNB Glucose -0.1 +0.3 +0.3 -0.3 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.4 +0.4 -0.3 -0.9
growth on oleic acid YNB Oleic Acid -0.1 -0.2 -0.1 +0.2 +0.0
auxotrophy Dropout Complete +0.1 +0.3 +0.0 -0.1 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.1 +0.4 +0.0 -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.2 -0.3 +0.1 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.0 -0.2 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.3 -0.1 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.3 -0.1 +0.3 +0.4
remove
mRNA_1736
plot
remove
mRNA_1737
plot
remove
mRNA_1738
remove
mRNA_1739
plot
remove
mRNA_1740
plot