Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10104 and 10105 are separated by 275 nucleotides
10105 and 10106 are separated by 152 nucleotides
10106 and 10107 are separated by 403 nucleotides
10107 and 10108 are separated by 309 nucleotides
mRNA_1736: 10104 - K01593 DDC aromatic-L-amino-acid decarboxylase, at 78,147 to 80,608
10104
mRNA_1737: 10105 - KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1, at 80,884 to 82,688
10105
mRNA_1738: 10106 - Hypothetical Protein, at 82,841 to 84,052
10106
mRNA_1739: 10107 - Hypothetical Protein, at 84,456 to 87,207
10107
mRNA_1740: 10108 - K20828 ZNF143_76, STAF zinc finger protein 143/76, at 87,517 to 89,814
10108
Group
Condition
mRNA
_1736
mRNA
_1737
mRNA
_1738
mRNA
_1739
mRNA
_1740
10104
10105
10106
10107
10108
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.3
-0.6
-1.0
-2.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.1
+0.3
-0.6
-2.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.1
+0.2
+0.0
-2.6
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.2
+0.1
+0.0
-1.3
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.0
-0.1
+0.1
-1.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.3
-1.1
+0.3
-0.6
growth on ypd
YPD
-0.0
+0.1
-0.4
-0.6
+0.1
growth on oleic acid
YNB Glucose
-0.0
+0.1
+0.2
-0.1
-1.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.3
-0.4
-0.1
+0.1
auxotrophy
YNB Glucose
+0.1
+0.1
+0.0
+0.1
-1.0
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.1
-0.4
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.4
-0.6
+0.3
+0.2
growth on ricinoleic acid
YNB Glucose
-0.1
+0.3
+0.3
-0.3
-0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.4
+0.4
-0.3
-0.9
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
-0.1
+0.2
+0.0
auxotrophy
Dropout Complete
+0.1
+0.3
+0.0
-0.1
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.1
+0.4
+0.0
-0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.2
-0.3
+0.1
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.3
+0.0
-0.2
+0.0
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
-0.3
-0.1
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.3
-0.1
+0.3
+0.4
remove
mRNA_1736
plot
remove
mRNA_1737
plot
remove
mRNA_1738
remove
mRNA_1739
plot
remove
mRNA_1740
plot