Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10105 and 10106 are separated by 152 nucleotides10106 and 10107 are separated by 403 nucleotides10107 and 10108 are separated by 309 nucleotides10108 and 10109 are separated by 1013 nucleotides mRNA_1737: 10105 - KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1, at 80,884 to 82,688 10105 mRNA_1738: 10106 - Hypothetical Protein, at 82,841 to 84,052 10106 mRNA_1739: 10107 - Hypothetical Protein, at 84,456 to 87,207 10107 mRNA_1740: 10108 - K20828 ZNF143_76, STAF zinc finger protein 143/76, at 87,517 to 89,814 10108 mRNA_1741: 10109 - HMMPfam-Calcipressin-PF04847, at 90,828 to 91,763 10109
Group Condition mRNA_1737 mRNA_1738 mRNA_1739 mRNA_1740 mRNA_1741
10105 10106 10107 10108 10109
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.6 -1.0 -2.7 +0.8
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -1.1 +0.3 -0.6 -1.9
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.3 -0.6 -2.7 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.2 +0.0 -2.6 +0.5
growth on ypd YPD +0.1 -0.4 -0.6 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.4 -0.1 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 +0.1 +0.3 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.6 +0.3 +0.2 +0.1
growth on oleic acid YNB Glucose +0.1 +0.2 -0.1 -1.0 +0.6
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.4 -0.1 +0.1 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.3 +0.1 +0.4 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 +0.0 -1.3 +1.0
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.1 +0.1 -1.0 +1.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.1 +0.3 +0.4 -0.1
auxotrophy YNB Glucose +0.1 +0.0 +0.1 -1.0 +1.1
growth on ricinoleic acid YNB Glucose +0.3 +0.3 -0.3 -0.8 +0.9
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 +0.0 +0.0 +0.5
auxotrophy Dropout Complete +0.3 +0.0 -0.1 -0.4 +0.7
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.4 -0.3 -0.9 +1.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.4 +0.0 -0.8 +1.3
growth on oleic acid YNB Oleic Acid -0.2 -0.1 +0.2 +0.0 +1.1
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