Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10106 and 10107 are separated by 403 nucleotides10107 and 10108 are separated by 309 nucleotides10108 and 10109 are separated by 1013 nucleotides10109 and 10110 are separated by 2907 nucleotides mRNA_1738: 10106 - Hypothetical Protein, at 82,841 to 84,052 10106 mRNA_1739: 10107 - Hypothetical Protein, at 84,456 to 87,207 10107 mRNA_1740: 10108 - K20828 ZNF143_76, STAF zinc finger protein 143/76, at 87,517 to 89,814 10108 mRNA_1741: 10109 - HMMPfam-Calcipressin-PF04847, at 90,828 to 91,763 10109 mRNA_1742: 10110 - SUPERFAMILY--SSF48097, at 94,671 to 96,223 10110
Group Condition mRNA_1738 mRNA_1739 mRNA_1740 mRNA_1741 mRNA_1742
10106 10107 10108 10109 10110
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 +0.3 -0.6 -1.9 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -1.0 -2.7 +0.8 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.0 -2.6 +0.5 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.6 -2.7 +0.4 +0.7
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1 -0.1 +0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 -1.0 +1.1 -0.7
growth on oleic acid YNB Glucose +0.2 -0.1 -1.0 +0.6 -0.3
growth on ypd YPD -0.4 -0.6 +0.1 -0.1 +0.6
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.0 -1.3 +1.0 -0.2
growth on ricinoleic acid YNB Glucose +0.3 -0.3 -0.8 +0.9 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 +0.3 +0.2 +0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.1 +0.1 +0.5 -0.1
auxotrophy YNB Glucose +0.0 +0.1 -1.0 +1.1 -0.2
auxotrophy Dropout Complete +0.0 -0.1 -0.4 +0.7 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.3 -0.9 +1.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.0 +0.0 +0.5 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.1 +0.4 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.1 +0.3 -0.5 +0.8
growth on oleic acid YNB Oleic Acid -0.1 +0.2 +0.0 +1.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.0 -0.8 +1.3 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.3 +0.4 -0.1 +0.9
remove
mRNA_1738
plot
remove
mRNA_1739
plot
remove
mRNA_1740
remove
mRNA_1741
plot
remove
mRNA_1742
plot