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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10107 and 10108 are separated by 309 nucleotides
10108 and 10109 are separated by 1013 nucleotides
10109 and 10110 are separated by 2907 nucleotides
10110 and 10111 are separated by 395 nucleotides
mRNA_1739: 10107 - Hypothetical Protein, at 84,456 to 87,207
10107
mRNA_1740: 10108 - K20828 ZNF143_76, STAF zinc finger protein 143/76, at 87,517 to 89,814
10108
mRNA_1741: 10109 - HMMPfam-Calcipressin-PF04847, at 90,828 to 91,763
10109
mRNA_1742: 10110 - SUPERFAMILY--SSF48097, at 94,671 to 96,223
10110
mRNA_1743: 10111 - HMMPfam-Protein of unknown function DUF262-PF03235, at 96,619 to 100,637
10111
Group
Condition
mRNA
_1739
mRNA
_1740
mRNA
_1741
mRNA
_1742
mRNA
_1743
10107
10108
10109
10110
10111
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.0
-2.7
+0.8
+0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.6
-1.9
-0.6
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-2.6
+0.5
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
-2.7
+0.4
+0.7
-0.1
growth on oleic acid
YNB Glucose
-0.1
-1.0
+0.6
-0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
+0.1
-0.4
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-1.0
+1.1
-0.7
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-1.3
+1.0
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.3
-0.8
+0.9
-0.3
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.9
+1.0
-0.1
-0.1
growth on ypd
YPD
-0.6
+0.1
-0.1
+0.6
-0.1
auxotrophy
YNB Glucose
+0.1
-1.0
+1.1
-0.2
-0.1
auxotrophy
Dropout Complete
-0.1
-0.4
+0.7
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.2
+0.1
-0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.1
+0.5
-0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.0
+0.5
-0.2
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.3
-0.5
+0.8
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.4
-0.1
+0.4
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.8
+1.3
+0.5
+0.1
growth on oleic acid
YNB Oleic Acid
+0.2
+0.0
+1.1
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.4
-0.1
+0.9
+0.0
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