Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10108 and 10109 are separated by 1013 nucleotides
10109 and 10110 are separated by 2907 nucleotides
10110 and 10111 are separated by 395 nucleotides
10111 and 10112 are separated by 205 nucleotides
mRNA_1740: 10108 - K20828 ZNF143_76, STAF zinc finger protein 143/76, at 87,517 to 89,814
10108
mRNA_1741: 10109 - HMMPfam-Calcipressin-PF04847, at 90,828 to 91,763
10109
mRNA_1742: 10110 - SUPERFAMILY--SSF48097, at 94,671 to 96,223
10110
mRNA_1743: 10111 - HMMPfam-Protein of unknown function DUF262-PF03235, at 96,619 to 100,637
10111
mRNA_1744: 10112 - Hypothetical Protein, at 100,843 to 102,379
10112
Group
Condition
mRNA
_1740
mRNA
_1741
mRNA
_1742
mRNA
_1743
mRNA
_1744
10108
10109
10110
10111
10112
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-1.9
-0.6
+0.0
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-2.6
+0.5
-0.2
-0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.7
+0.8
+0.1
-0.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-2.7
+0.4
+0.7
-0.1
+0.3
growth on oleic acid
YNB Glucose
-1.0
+0.6
-0.3
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-1.3
+1.0
-0.2
-0.1
-0.0
auxotrophy
YNB Glucose
-1.0
+1.1
-0.2
-0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.1
-0.4
-0.2
+0.3
auxotrophy
YNB Glucose 75mM Arginine
-1.0
+1.1
-0.7
-0.1
+0.4
auxotrophy
Dropout Complete
-0.4
+0.7
-0.2
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.1
-0.2
-0.1
+0.0
growth on ricinoleic acid
YNB Glucose
-0.8
+0.9
-0.3
-0.0
+0.4
growth on ypd
YPD
+0.1
-0.1
+0.6
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
-0.5
+0.8
+0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.9
+1.0
-0.1
-0.1
+0.6
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.5
-0.1
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
-0.1
+0.4
+0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.5
-0.2
+0.3
+0.4
growth on oleic acid
YNB Oleic Acid
+0.0
+1.1
-0.1
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.1
+0.9
+0.0
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
+1.3
+0.5
+0.1
+0.4
remove
mRNA_1740
plot
remove
mRNA_1741
plot
remove
mRNA_1742
remove
mRNA_1743
plot
remove
mRNA_1744
plot