Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10109 and 10110 are separated by 2907 nucleotides10110 and 10111 are separated by 395 nucleotides10111 and 10112 are separated by 205 nucleotides10112 and 10113 are separated by 437 nucleotides mRNA_1741: 10109 - HMMPfam-Calcipressin-PF04847, at 90,828 to 91,763 10109 mRNA_1742: 10110 - SUPERFAMILY--SSF48097, at 94,671 to 96,223 10110 mRNA_1743: 10111 - HMMPfam-Protein of unknown function DUF262-PF03235, at 96,619 to 100,637 10111 mRNA_1744: 10112 - Hypothetical Protein, at 100,843 to 102,379 10112 mRNA_1745: 10113 - K09829 ERG2 C-8 sterol isomerase, at 102,817 to 103,817 10113
Group Condition mRNA_1741 mRNA_1742 mRNA_1743 mRNA_1744 mRNA_1745
10109 10110 10111 10112 10113
ypd buoyancy 40 hrs No Buoyancy Separation -1.9 -0.6 +0.0 -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.4 -0.2 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.2 -0.1 +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.2 -0.1 -0.2 N.D.
growth on oleic acid YNB Glucose +0.6 -0.3 -0.1 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.8 +0.1 -0.3 N.D.
auxotrophy Dropout Complete +0.7 -0.2 -0.1 -0.2 N.D.
growth on ypd YPD -0.1 +0.6 -0.1 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.5 -0.1 -0.0 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.4 +0.1 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.8 +0.1 -0.3 -0.0 N.D.
auxotrophy YNB Glucose +1.1 -0.2 -0.1 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +1.0 -0.2 -0.1 -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +1.1 -0.7 -0.1 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.9 +0.0 +0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.9 -0.3 -0.0 +0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.5 -0.2 +0.3 +0.4 N.D.
growth on oleic acid YNB Oleic Acid +1.1 -0.1 -0.1 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.4 +0.7 -0.1 +0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +1.0 -0.1 -0.1 +0.6 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +1.3 +0.5 +0.1 +0.4 N.D.
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