Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10112 and 10113 are separated by 437 nucleotides10113 and 10114 are separated by 408 nucleotides10114 and 10115 are separated by 586 nucleotides10115 and 10116 are separated by 477 nucleotides mRNA_1744: 10112 - Hypothetical Protein, at 100,843 to 102,379 10112 mRNA_1745: 10113 - K09829 ERG2 C-8 sterol isomerase, at 102,817 to 103,817 10113 mRNA_1746: 10114 - KOG2897 DNA-binding protein YL1 and related proteins, at 104,226 to 106,402 10114 mRNA_1747: 10115 - Hypothetical Protein, at 106,989 to 107,598 10115 mRNA_1748: 10116 - HMMPfam-Oxidoreductase family, NAD-binding Rossmann fold-PF01408,HMMPfam-Putative oxidoreductase C terminal-PF08635,SUPERFAMILY--SSF51735,SUPERFAMILY--SSF55347, at 108,076 to 110,507 10116
Group Condition mRNA_1744 mRNA_1745 mRNA_1746 mRNA_1747 mRNA_1748
10112 10113 10114 10115 10116
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 N.D. +0.9 -4.0 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. -0.7 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. -0.6 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 N.D. -0.4 -0.2 -0.1
auxotrophy YNB Glucose -0.2 N.D. -0.6 -0.2 +0.3
auxotrophy Dropout Complete -0.2 N.D. -0.2 -0.5 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. -1.0 +0.2 +0.0
growth on ypd YPD -0.1 N.D. -0.1 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. -0.6 +0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. -0.5 +0.7 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.0 +0.0 +0.0
growth on ricinoleic acid YNB Glucose +0.4 N.D. -0.5 +0.1 +0.3
growth on oleic acid YNB Oleic Acid +0.1 N.D. -0.1 +0.2 +0.2
growth on oleic acid YNB Glucose -0.3 N.D. +0.4 +0.1 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 N.D. -0.2 +0.4 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. +0.5 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. -0.0 +0.7 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 N.D. -0.2 +0.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. -0.1 +0.4 +0.5
ypd buoyancy 40 hrs Low Buoyancy +0.4 N.D. +0.5 +0.4 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. +0.9 +0.7 +0.3
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