Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10114 and 10115 are separated by 586 nucleotides10115 and 10116 are separated by 477 nucleotides10116 and 10117 are separated by 543 nucleotides10117 and 10118 are separated by 960 nucleotides mRNA_1746: 10114 - KOG2897 DNA-binding protein YL1 and related proteins, at 104,226 to 106,402 10114 mRNA_1747: 10115 - Hypothetical Protein, at 106,989 to 107,598 10115 mRNA_1748: 10116 - HMMPfam-Oxidoreductase family, NAD-binding Rossmann fold-PF01408,HMMPfam-Putative oxidoreductase C terminal-PF08635,SUPERFAMILY--SSF51735,SUPERFAMILY--SSF55347, at 108,076 to 110,507 10116 mRNA_1749: 10117 - Hypothetical Protein, at 111,051 to 112,240 10117 mRNA_1750: 10118 - K16185 RRAGA_B Ras-related GTP-binding protein A/B, at 113,201 to 114,530 10118
Group Condition mRNA_1746 mRNA_1747 mRNA_1748 mRNA_1749 mRNA_1750
10114 10115 10116 10117 10118
ypd buoyancy 40 hrs No Buoyancy Separation +0.9 -4.0 +0.0 -0.6 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.1 -0.4 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.1 -0.2 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -1.0 +0.2 +0.0 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.2 -0.1 -0.1 N.D.
auxotrophy YNB Glucose -0.6 -0.2 +0.3 -0.1 N.D.
auxotrophy Dropout Complete -0.2 -0.5 +0.3 +0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.1 +0.3 -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.4 -0.1 -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.7 +0.2 -0.3 N.D.
growth on ricinoleic acid YNB Glucose -0.5 +0.1 +0.3 +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.3 +0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.7 +0.1 -0.6 N.D.
growth on ypd YPD -0.1 +0.1 -0.1 +0.3 N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.2 +0.2 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.5 +0.2 -0.3 +0.1 N.D.
growth on oleic acid YNB Glucose +0.4 +0.1 +0.3 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 +0.0 +0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.4 +0.5 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.5 +0.4 +0.1 +0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.9 +0.7 +0.3 -0.0 N.D.
remove
mRNA_1746
plot
remove
mRNA_1747
plot
remove
mRNA_1748
remove
mRNA_1749
plot
remove
mRNA_1750
plot