Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10116 and 10117 are separated by 543 nucleotides10117 and 10118 are separated by 960 nucleotides10118 and 10119 are separated by 144 nucleotides10119 and 10120 are separated by 163 nucleotides mRNA_1748: 10116 - HMMPfam-Oxidoreductase family, NAD-binding Rossmann fold-PF01408,HMMPfam-Putative oxidoreductase C terminal-PF08635,SUPERFAMILY--SSF51735,SUPERFAMILY--SSF55347, at 108,076 to 110,507 10116 mRNA_1749: 10117 - Hypothetical Protein, at 111,051 to 112,240 10117 mRNA_1750: 10118 - K16185 RRAGA_B Ras-related GTP-binding protein A/B, at 113,201 to 114,530 10118 mRNA_1751: 10119 - KOG2726 Mitochondrial polypeptide chain release factor, at 114,675 to 115,608 10119 mRNA_1752: 10120 - K15363 FAN1, MTMR15 fanconi-associated nuclease 1, at 115,772 to 119,229 10120
Group Condition mRNA_1748 mRNA_1749 mRNA_1750 mRNA_1751 mRNA_1752
10116 10117 10118 10119 10120
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.1 N.D. -0.8 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.3 N.D. -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.0 N.D. -0.5 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.6 N.D. -0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.2 N.D. +0.1 -0.1
auxotrophy Dropout Complete +0.3 +0.0 N.D. -0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.1 N.D. -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.4 N.D. +0.6 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.0 N.D. -0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.3 N.D. +0.0 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.0 N.D. -0.3 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 N.D. +0.5 -0.0
auxotrophy YNB Glucose +0.3 -0.1 N.D. +0.0 +0.0
growth on ricinoleic acid YNB Glucose +0.3 +0.2 N.D. -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.4 N.D. -0.2 +0.1
growth on oleic acid YNB Oleic Acid +0.2 +0.1 N.D. +0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.6 N.D. -0.2 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.6 N.D. +1.0 +0.2
growth on oleic acid YNB Glucose +0.3 -0.2 N.D. +0.4 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.5 +0.1 N.D. -0.0 +0.3
growth on ypd YPD -0.1 +0.3 N.D. +0.7 -0.0
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