Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10120 and 10121 are separated by 278 nucleotides10121 and 10122 are separated by 36 nucleotides10122 and 10123 are separated by 128 nucleotides10123 and 10124 are separated by 157 nucleotides mRNA_1752: 10120 - K15363 FAN1, MTMR15 fanconi-associated nuclease 1, at 115,772 to 119,229 10120 mRNA_1753: 10121 - BLAST ubiquitin ligase SCF complex subunit Cullin [Rhizocto..., at 119,508 to 121,647 10121 mRNA_1754: 10122 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 121,684 to 123,500 10122 mRNA_1755: 10123 - K00326 E1.6.2.2 cytochrome-b5 reductase, at 123,629 to 124,708 10123 mRNA_1756: 10124 - KOG2821 RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin A, at 124,866 to 126,194 10124
Group Condition mRNA_1752 mRNA_1753 mRNA_1754 mRNA_1755 mRNA_1756
10120 10121 10122 10123 10124
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.0 +0.2 -1.5 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 +0.0 -0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 +0.0 -0.3 -0.3
growth on ypd YPD -0.0 -0.1 -0.4 +0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.4 +0.1 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.4 -0.4 +0.7 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 -0.2 +0.5 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.2 -0.3 +0.7 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.2 +0.3 +0.6 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.0 +0.2 +0.5 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.0 -0.2 +1.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 +0.1 +0.5 +0.1
growth on oleic acid YNB Glucose +0.1 -0.0 -0.1 +1.4 +0.3
auxotrophy Dropout Complete -0.1 -0.2 +0.1 +1.8 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.1 -0.0 +1.6 +0.1
auxotrophy YNB Glucose +0.0 -0.0 +0.0 +1.8 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.0 +0.2 +1.6 +0.1
growth on ricinoleic acid YNB Glucose -0.0 +0.1 -0.2 +2.3 -0.2
growth on oleic acid YNB Oleic Acid +0.1 -0.1 -0.1 +2.2 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.2 +0.0 +3.4 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.3 -0.3 +4.4 -0.0
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