Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10122 and 10123 are separated by 128 nucleotides10123 and 10124 are separated by 157 nucleotides10124 and 10125 are separated by 153 nucleotides10125 and 10126 are separated by 706 nucleotides mRNA_1754: 10122 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 121,684 to 123,500 10122 mRNA_1755: 10123 - K00326 E1.6.2.2 cytochrome-b5 reductase, at 123,629 to 124,708 10123 mRNA_1756: 10124 - KOG2821 RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin A, at 124,866 to 126,194 10124 mRNA_1757: 10125 - KOG1426 FOG RCC1 domain, at 126,348 to 129,051 10125 mRNA_1758: 10126 - KOG2998 Uncharacterized conserved protein, at 129,758 to 131,068 10126
Group Condition mRNA_1754 mRNA_1755 mRNA_1756 mRNA_1757 mRNA_1758
10122 10123 10124 10125 10126
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.1 +0.4 +0.1 -1.7
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.4 -0.3 +0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.3 -0.3 -0.1 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -1.5 +0.2 +0.1 +0.7
growth on ypd YPD -0.4 +0.3 -0.1 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.7 -0.3 -0.3 +0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +1.1 -0.1 -0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.5 -0.1 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.5 -0.2 -0.0 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.5 +0.1 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.7 +0.0 +0.2 +0.4
auxotrophy YNB Glucose 75mM Methionine -0.0 +1.6 +0.1 -0.1 -0.4
auxotrophy Dropout Complete +0.1 +1.8 +0.2 -0.3 -0.6
growth on oleic acid YNB Glucose -0.1 +1.4 +0.3 -0.2 +0.0
auxotrophy YNB Glucose +0.0 +1.8 +0.1 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.2 +1.6 +0.1 -0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.6 +0.1 +0.2 +0.8
growth on oleic acid YNB Oleic Acid -0.1 +2.2 +0.0 +0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.2 +2.3 -0.2 -0.0 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +3.4 -0.3 +0.0 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +4.4 -0.0 -0.1 -0.1
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