Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10122 and 10123 are separated by 128 nucleotides
10123 and 10124 are separated by 157 nucleotides
10124 and 10125 are separated by 153 nucleotides
10125 and 10126 are separated by 706 nucleotides
mRNA_1754: 10122 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 121,684 to 123,500
10122
mRNA_1755: 10123 - K00326 E1.6.2.2 cytochrome-b5 reductase, at 123,629 to 124,708
10123
mRNA_1756: 10124 - KOG2821 RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin A, at 124,866 to 126,194
10124
mRNA_1757: 10125 - KOG1426 FOG RCC1 domain, at 126,348 to 129,051
10125
mRNA_1758: 10126 - KOG2998 Uncharacterized conserved protein, at 129,758 to 131,068
10126
Group
Condition
mRNA
_1754
mRNA
_1755
mRNA
_1756
mRNA
_1757
mRNA
_1758
10122
10123
10124
10125
10126
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.1
+0.4
+0.1
-1.7
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.4
-0.3
+0.1
-0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.3
-0.3
-0.1
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-1.5
+0.2
+0.1
+0.7
growth on ypd
YPD
-0.4
+0.3
-0.1
+0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
+0.7
-0.3
-0.3
+0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+1.1
-0.1
-0.3
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.5
-0.1
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.5
-0.2
-0.0
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.5
+0.1
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.7
+0.0
+0.2
+0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+1.6
+0.1
-0.1
-0.4
auxotrophy
Dropout Complete
+0.1
+1.8
+0.2
-0.3
-0.6
growth on oleic acid
YNB Glucose
-0.1
+1.4
+0.3
-0.2
+0.0
auxotrophy
YNB Glucose
+0.0
+1.8
+0.1
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+1.6
+0.1
-0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.3
+0.6
+0.1
+0.2
+0.8
growth on oleic acid
YNB Oleic Acid
-0.1
+2.2
+0.0
+0.1
-0.1
growth on ricinoleic acid
YNB Glucose
-0.2
+2.3
-0.2
-0.0
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+3.4
-0.3
+0.0
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+4.4
-0.0
-0.1
-0.1
remove
mRNA_1754
plot
remove
mRNA_1755
plot
remove
mRNA_1756
remove
mRNA_1757
plot
remove
mRNA_1758
plot