Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10127 and 10128 are separated by 429 nucleotides
10128 and 10129 are separated by 3523 nucleotides
10129 and 10130 are separated by 572 nucleotides
10130 and 10131 are separated by 364 nucleotides
mRNA_1759: 10127 - K13345 PEX12, PAF3 peroxin-12, at 132,751 to 134,282
10127
mRNA_1760: 10128 - KOG0940 Ubiquitin protein ligase RSP5/NEDD4, at 134,712 to 138,303
10128
mRNA_1761: 10129 - K07189 PPP1R3 protein phosphatase 1 regulatory subunit 3A/B/C/D/E, at 141,827 to 142,144
10129
mRNA_1762: 10130 - Hypothetical Protein, at 142,717 to 145,078
10130
mRNA_1763: 10131 - Hypothetical Protein, at 145,443 to 147,690
10131
Group
Condition
mRNA
_1759
mRNA
_1760
mRNA
_1761
mRNA
_1762
mRNA
_1763
10127
10128
10129
10130
10131
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.1
-1.6
-0.2
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.3
-1.1
-0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.4
+0.1
-0.6
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.0
-0.6
+0.2
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
-0.8
-0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.3
-0.5
-0.3
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.2
-0.2
-0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.1
+0.2
-0.5
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.3
-0.2
-0.1
+0.0
growth on oleic acid
YNB Oleic Acid
N.D.
+0.2
-0.0
-0.0
-0.1
growth on oleic acid
YNB Glucose
N.D.
+0.1
-0.2
+0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.1
+0.6
-0.3
+0.0
auxotrophy
YNB Glucose
N.D.
-0.0
+0.2
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
+1.2
-0.1
-0.8
growth on ricinoleic acid
YNB Glucose
N.D.
+0.5
+0.4
-0.3
-0.0
auxotrophy
Dropout Complete
N.D.
+0.2
+0.4
-0.3
+0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
+0.8
-0.2
+0.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.0
+0.3
+0.1
+0.3
growth on ypd
YPD
N.D.
+0.2
+0.5
-0.0
+0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.3
+1.8
+0.1
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
+1.9
+0.1
-0.0
remove
mRNA_1759
plot
remove
mRNA_1760
plot
remove
mRNA_1761
remove
mRNA_1762
plot
remove
mRNA_1763
plot