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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10131 and 10132 are separated by 153 nucleotides
10132 and 10133 are separated by 206 nucleotides
10133 and 10134 are separated by 1763 nucleotides
10134 and 10135 are separated by 364 nucleotides
mRNA_1763: 10131 - Hypothetical Protein, at 145,443 to 147,690
10131
mRNA_1764: 10132 - KOG0867 Glutathione S-transferase, at 147,844 to 149,167
10132
mRNA_1765: 10133 - HMMPfam-FUN14 family-PF04930, at 149,374 to 150,218
10133
mRNA_1766: 10134 - K03097 CSNK2A casein kinase II subunit alpha, at 151,982 to 154,408
10134
mRNA_1767: 10135 - HMMPfam-F-box-like-PF12937, at 154,773 to 156,142
10135
Group
Condition
mRNA
_1763
mRNA
_1764
mRNA
_1765
mRNA
_1766
mRNA
_1767
10131
10132
10133
10134
10135
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.2
-0.9
+0.5
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.1
-0.5
-0.4
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.1
-0.9
-0.3
+0.7
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.3
+0.2
-0.4
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.1
-0.0
-0.1
+0.0
growth on oleic acid
YNB Oleic Acid
-0.1
+0.3
+0.1
-0.1
-0.5
growth on ricinoleic acid
YNB Glucose
-0.0
+0.0
-0.1
-0.1
+0.2
growth on ypd
YPD
+0.7
-0.1
-0.3
-0.1
-0.1
growth on oleic acid
YNB Glucose
+0.1
+0.6
-0.2
+0.1
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.1
+0.0
-0.1
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.3
+0.4
+0.1
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.3
-0.2
-0.3
+0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.1
+0.4
-0.2
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.4
-0.2
+0.3
+0.3
auxotrophy
YNB Glucose
+0.2
+0.5
-0.4
+0.1
+0.5
auxotrophy
Dropout Complete
+0.3
+0.3
-0.1
+0.3
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.2
-0.2
+0.7
+1.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.8
+0.6
+0.3
+0.5
+0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
+0.1
+0.5
+0.4
+0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
+0.4
+0.3
+0.5
+0.8
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+0.4
-0.2
+0.5
+0.7
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