Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10138 and 10139 are separated by 144 nucleotides10139 and 10140 are separated by 945 nucleotides10140 and 10141 are separated by 749 nucleotides10141 and 10142 are separated by 252 nucleotides mRNA_1770: 10138 - HMMPfam-F-box-like-PF12937, at 161,532 to 163,380 10138 mRNA_1771: 10139 - K14312 NUP155, NUP170, NUP157 nuclear pore complex protein Nup155, at 163,525 to 168,544 10139 mRNA_1772: 10140 - K01480 speB agmatinase, at 169,490 to 170,600 10140 mRNA_1773: 10141 - Hypothetical Protein, at 171,350 to 172,928 10141 mRNA_1774: 10142 - Hypothetical Protein, at 173,181 to 173,906 10142
Group Condition mRNA_1770 mRNA_1771 mRNA_1772 mRNA_1773 mRNA_1774
10138 10139 10140 10141 10142
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 N.D. -0.2 -0.3 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 N.D. -0.2 +0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 N.D. -0.0 -0.5 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 N.D. +0.3 +0.3 -0.3
growth on oleic acid YNB Oleic Acid +0.1 N.D. -0.3 -0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. -0.1 +0.1 +0.1
auxotrophy Dropout Complete +0.0 N.D. +0.0 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 N.D. -0.0 -0.1 -0.0
growth on oleic acid YNB Glucose +0.1 N.D. +0.1 +0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 N.D. -0.3 +0.3 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. +0.3 +0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.5 N.D. +0.2 -0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. +0.1 +0.2 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. -0.2 +0.3 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 N.D. +0.3 +0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. +0.1 +0.1 +0.3
auxotrophy YNB Glucose -0.1 N.D. +0.4 +0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. +0.0 +0.3 +0.5
growth on ypd YPD +0.3 N.D. +0.1 +0.0 +0.5
growth on ricinoleic acid YNB Glucose +0.6 N.D. +0.3 +0.1 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +0.5 +0.5 -0.1
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