Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10143 and 10144 are separated by 983 nucleotides
10144 and 10145 are separated by 622 nucleotides
10145 and 10146 are separated by 559 nucleotides
10146 and 10147 are separated by 571 nucleotides
mRNA_1775: 10143 - KOG1289 Amino acid transporters, at 174,192 to 176,320
10143
mRNA_1776: 10144 - K01869 LARS, leuS leucyl-tRNA synthetase, at 177,304 to 181,065
10144
mRNA_1777: 10145 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 181,688 to 183,339
10145
mRNA_1778: 10146 - HMMPfam-Protein of unknown function (DUF3140)-PF11338, at 183,899 to 184,487
10146
mRNA_1779: 10147 - KOG1336 Monodehydroascorbate/ferredoxin reductase, at 185,059 to 187,419
10147
Group
Condition
mRNA
_1775
mRNA
_1776
mRNA
_1777
mRNA
_1778
mRNA
_1779
10143
10144
10145
10146
10147
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
N.D.
-0.0
-0.2
-1.1
auxotrophy
Dropout Complete
-0.3
N.D.
-0.6
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.3
N.D.
-0.4
-0.2
+0.4
growth on ricinoleic acid
YNB Glucose
-0.2
N.D.
-0.2
-0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
+0.1
-0.4
-0.2
auxotrophy
YNB Glucose
-0.3
N.D.
-0.3
+0.0
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
N.D.
+0.1
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
N.D.
+0.3
-0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
+0.0
+0.1
-0.2
growth on oleic acid
YNB Glucose
-0.1
N.D.
-0.1
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
N.D.
-0.1
-0.3
+0.5
growth on oleic acid
YNB Oleic Acid
-0.1
N.D.
-0.2
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.3
N.D.
-0.4
+0.3
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
N.D.
+0.3
-0.3
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
N.D.
+0.0
+0.0
+0.2
growth on ypd
YPD
+0.1
N.D.
+0.1
+0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
N.D.
+0.3
-0.0
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
N.D.
+0.1
+0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
N.D.
+0.3
-0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
N.D.
+0.0
+0.2
+0.6
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
N.D.
+0.1
+0.4
+0.1
remove
mRNA_1775
plot
remove
mRNA_1776
plot
remove
mRNA_1777
remove
mRNA_1778
plot
remove
mRNA_1779
plot