Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10146 and 10147 are separated by 571 nucleotides10147 and 10148 are separated by 675 nucleotides10148 and 10149 are separated by 1370 nucleotides10149 and 10150 are separated by 277 nucleotides mRNA_1778: 10146 - HMMPfam-Protein of unknown function (DUF3140)-PF11338, at 183,899 to 184,487 10146 mRNA_1779: 10147 - KOG1336 Monodehydroascorbate/ferredoxin reductase, at 185,059 to 187,419 10147 mRNA_1780: 10148 - K03097 CSNK2A casein kinase II subunit alpha, at 188,095 to 190,025 10148 mRNA_1781: 10149 - K15109 SLC25A20_29, CACT, CACL, CRC1 solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29, at 191,396 to 193,155 10149 mRNA_1782: 10150 - Hypothetical Protein, at 193,433 to 193,902 10150
Group Condition mRNA_1778 mRNA_1779 mRNA_1780 mRNA_1781 mRNA_1782
10146 10147 10148 10149 10150
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -1.1 N.D. +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.2 N.D. -0.1 N.D.
auxotrophy Dropout Complete -0.3 +0.1 N.D. -0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.0 N.D. -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.1 N.D. -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.2 N.D. -0.4 N.D.
growth on oleic acid YNB Glucose -0.1 +0.1 N.D. -0.2 N.D.
growth on ypd YPD +0.1 -0.1 N.D. -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.4 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.1 N.D. +0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.2 N.D. -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 N.D. +0.1 N.D.
auxotrophy YNB Glucose +0.0 +0.2 N.D. -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 N.D. -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 N.D. -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.4 N.D. -0.5 N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.2 N.D. +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.1 N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.2 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.5 N.D. +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.6 N.D. +0.8 N.D.
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