Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10152 and 10153 are separated by 747 nucleotides
10153 and 10154 are separated by 185 nucleotides
10154 and 10155 are separated by 414 nucleotides
10155 and 10156 are separated by 168 nucleotides
mRNA_1784: 10152 - KOG0257 Kynurenine aminotransferase, glutamine transaminase K, at 201,521 to 204,096
10152
mRNA_1785: 10153 - K04077 groEL, HSPD1 chaperonin GroEL, at 204,844 to 206,779
10153
mRNA_1786: 10154 - K04078 groES, HSPE1 chaperonin GroES, at 206,965 to 207,485
10154
mRNA_1787: 10155 - HMMPfam-Tctex-1 family-PF03645, at 207,900 to 208,690
10155
mRNA_1788: 10156 - K16368 DGK1 diacylglycerol kinase (CTP), at 208,859 to 210,446
10156
Group
Condition
mRNA
_1784
mRNA
_1785
mRNA
_1786
mRNA
_1787
mRNA
_1788
10152
10153
10154
10155
10156
auxotrophy
Dropout Complete
-0.2
N.D.
N.D.
-0.1
-1.4
auxotrophy
YNB Glucose 75mM Arginine
+0.1
N.D.
N.D.
-0.1
-1.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
N.D.
N.D.
-1.0
-0.5
growth on oleic acid
YNB Glucose
-0.0
N.D.
N.D.
-0.2
-0.8
auxotrophy
YNB Glucose 75mM Methionine
+0.1
N.D.
N.D.
+0.3
-1.3
auxotrophy
YNB Glucose
-0.0
N.D.
N.D.
+0.2
-0.9
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
N.D.
N.D.
+0.2
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
N.D.
N.D.
-0.3
-1.0
growth on ypd
YPD
+0.4
N.D.
N.D.
-0.1
-0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
N.D.
N.D.
+0.4
-0.8
growth on ricinoleic acid
YNB Glucose
+0.3
N.D.
N.D.
+0.1
-0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
N.D.
N.D.
-0.4
-0.4
growth on oleic acid
YNB Oleic Acid
-0.1
N.D.
N.D.
-0.0
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
N.D.
-0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
N.D.
N.D.
-0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
N.D.
N.D.
+0.1
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.0
N.D.
N.D.
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
N.D.
N.D.
+0.5
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
N.D.
N.D.
-0.0
+1.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
N.D.
N.D.
+0.5
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
N.D.
N.D.
+0.8
-0.0
remove
mRNA_1784
plot
remove
mRNA_1785
plot
remove
mRNA_1786
remove
mRNA_1787
plot
remove
mRNA_1788
plot