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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10155 and 10156 are separated by 168 nucleotides
10156 and 10157 are separated by 522 nucleotides
10157 and 10158 are separated by 261 nucleotides
10158 and 10159 are separated by 248 nucleotides
mRNA_1787: 10155 - HMMPfam-Tctex-1 family-PF03645, at 207,900 to 208,690
10155
mRNA_1788: 10156 - K16368 DGK1 diacylglycerol kinase (CTP), at 208,859 to 210,446
10156
mRNA_1789: 10157 - K10573 UBE2A, UBC2, RAD6A ubiquitin-conjugating enzyme E2 A, at 210,969 to 211,922
10157
mRNA_1790: 10158 - Hypothetical Protein, at 212,184 to 213,881
10158
mRNA_1791: 10159 - Hypothetical Protein, at 214,130 to 214,450
10159
Group
Condition
mRNA
_1787
mRNA
_1788
mRNA
_1789
mRNA
_1790
mRNA
_1791
10155
10156
10157
10158
10159
auxotrophy
Dropout Complete
-0.1
-1.4
N.D.
+0.3
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.0
-0.5
N.D.
-0.0
+0.4
growth on oleic acid
YNB Glucose
-0.2
-0.8
N.D.
-0.3
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-1.4
N.D.
+0.6
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-1.0
N.D.
+0.3
+0.2
growth on ypd
YPD
-0.1
-0.8
N.D.
+0.4
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-1.3
N.D.
+0.4
-0.0
growth on ricinoleic acid
YNB Glucose
+0.1
-0.9
N.D.
+0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.4
N.D.
+0.3
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.1
N.D.
-0.0
+0.1
auxotrophy
YNB Glucose
+0.2
-0.9
N.D.
+0.5
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.4
N.D.
+0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.1
N.D.
-0.1
+0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.4
N.D.
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
-0.0
-0.3
N.D.
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
-0.8
N.D.
+0.2
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.1
N.D.
+0.0
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
+1.2
N.D.
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
+0.2
N.D.
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
+0.0
N.D.
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.8
-0.0
N.D.
+0.1
+0.2
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