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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10157 and 10158 are separated by 261 nucleotides
10158 and 10159 are separated by 248 nucleotides
10159 and 10160 are separated by 273 nucleotides
10160 and 10161 are separated by 63 nucleotides
mRNA_1789: 10157 - K10573 UBE2A, UBC2, RAD6A ubiquitin-conjugating enzyme E2 A, at 210,969 to 211,922
10157
mRNA_1790: 10158 - Hypothetical Protein, at 212,184 to 213,881
10158
mRNA_1791: 10159 - Hypothetical Protein, at 214,130 to 214,450
10159
mRNA_1792: 10160 - Hypothetical Protein, at 214,724 to 215,217
10160
mRNA_1793: 10161 - K02867 RP-L11, MRPL11, rplK large subunit ribosomal protein L11, at 215,281 to 215,917
10161
Group
Condition
mRNA
_1789
mRNA
_1790
mRNA
_1791
mRNA
_1792
mRNA
_1793
10157
10158
10159
10160
10161
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.1
+0.2
-0.6
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.2
-0.2
+0.3
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.0
+0.1
-0.1
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.2
-0.2
-0.0
N.D.
growth on oleic acid
YNB Glucose
N.D.
-0.3
+0.2
+0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.1
+0.0
+0.2
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
+0.0
+0.2
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
-0.0
+0.1
N.D.
auxotrophy
Dropout Complete
N.D.
+0.3
-0.1
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
+0.2
+0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
+0.1
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.2
+0.3
-0.2
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
+0.3
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.6
-0.1
+0.0
N.D.
auxotrophy
YNB Glucose
N.D.
+0.5
-0.1
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.1
+0.4
+0.0
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.4
-0.0
+0.2
N.D.
growth on ypd
YPD
N.D.
+0.4
-0.1
+0.3
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.3
+0.2
+0.2
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.0
+0.4
+0.4
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.3
-0.0
+0.5
N.D.
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