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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10158 and 10159 are separated by 248 nucleotides
10159 and 10160 are separated by 273 nucleotides
10160 and 10161 are separated by 63 nucleotides
10161 and 10162 are separated by 98 nucleotides
mRNA_1790: 10158 - Hypothetical Protein, at 212,184 to 213,881
10158
mRNA_1791: 10159 - Hypothetical Protein, at 214,130 to 214,450
10159
mRNA_1792: 10160 - Hypothetical Protein, at 214,724 to 215,217
10160
mRNA_1793: 10161 - K02867 RP-L11, MRPL11, rplK large subunit ribosomal protein L11, at 215,281 to 215,917
10161
mRNA_1794: 10162 - BLAST peroxisomal membrane anchor protein [Aspergillus ..., at 216,016 to 217,175
10162
Group
Condition
mRNA
_1790
mRNA
_1791
mRNA
_1792
mRNA
_1793
mRNA
_1794
10158
10159
10160
10161
10162
growth on oleic acid
YNB Oleic Acid
+0.1
+0.3
+0.1
N.D.
-1.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.0
+0.2
N.D.
-0.3
growth on oleic acid
YNB Glucose
-0.3
+0.2
+0.1
N.D.
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.2
+0.3
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.2
-0.0
N.D.
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
-0.0
+0.5
N.D.
-0.8
auxotrophy
Dropout Complete
+0.3
-0.1
+0.0
N.D.
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.0
+0.2
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.2
-0.6
N.D.
+0.5
growth on ricinoleic acid
YNB Glucose
+0.1
-0.0
+0.1
N.D.
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.1
-0.1
N.D.
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
+0.2
+0.2
N.D.
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.6
-0.1
+0.0
N.D.
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.1
+0.1
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.2
+0.1
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.4
-0.0
+0.2
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.3
-0.2
N.D.
+0.3
auxotrophy
YNB Glucose
+0.5
-0.1
+0.1
N.D.
+0.2
growth on ypd
YPD
+0.4
-0.1
+0.3
N.D.
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.4
+0.4
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.4
+0.0
N.D.
+0.4
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