Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10161 and 10162 are separated by 98 nucleotides10162 and 10163 are separated by 182 nucleotides10163 and 10164 are separated by 214 nucleotides10164 and 10165 are separated by 110 nucleotides mRNA_1793: 10161 - K02867 RP-L11, MRPL11, rplK large subunit ribosomal protein L11, at 215,281 to 215,917 10161 mRNA_1794: 10162 - BLAST peroxisomal membrane anchor protein [Aspergillus ..., at 216,016 to 217,175 10162 mRNA_1795: 10163 - K12844 PRPF31 U4/U6 small nuclear ribonucleoprotein PRP31, at 217,358 to 219,404 10163 mRNA_1796: 10164 - K10878 SPO11 meiotic recombination protein SPO11, at 219,619 to 222,270 10164 mRNA_1797: 10165 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 222,381 to 224,884 10165
Group Condition mRNA_1793 mRNA_1794 mRNA_1795 mRNA_1796 mRNA_1797
10161 10162 10163 10164 10165
growth on oleic acid YNB Oleic Acid N.D. -1.4 N.D. -0.5 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.8 N.D. -0.6 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 N.D. -0.6 -0.5
growth on oleic acid YNB Glucose N.D. -0.2 N.D. -1.0 -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 N.D. -0.9 -0.1
growth on ricinoleic acid YNB Glucose N.D. -0.0 N.D. -0.7 -0.3
auxotrophy Dropout Complete N.D. -0.1 N.D. -0.7 -0.3
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 N.D. -0.6 -0.2
auxotrophy YNB Glucose N.D. +0.2 N.D. -0.4 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.3 N.D. +0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.1 N.D. -0.5 +0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 N.D. -0.0 +0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 N.D. -0.2 +0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.0 N.D. +0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. +0.3 N.D. -0.2 +0.3
growth on ypd YPD N.D. +0.2 N.D. +0.2 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.5 N.D. +0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 N.D. +0.3 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 N.D. +0.9 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.4 N.D. +0.7 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.3 N.D. +1.0 -0.1
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