Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10162 and 10163 are separated by 182 nucleotides10163 and 10164 are separated by 214 nucleotides10164 and 10165 are separated by 110 nucleotides10165 and 10166 are separated by 513 nucleotides mRNA_1794: 10162 - BLAST peroxisomal membrane anchor protein [Aspergillus ..., at 216,016 to 217,175 10162 mRNA_1795: 10163 - K12844 PRPF31 U4/U6 small nuclear ribonucleoprotein PRP31, at 217,358 to 219,404 10163 mRNA_1796: 10164 - K10878 SPO11 meiotic recombination protein SPO11, at 219,619 to 222,270 10164 mRNA_1797: 10165 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 222,381 to 224,884 10165 mRNA_1798: 10166 - KOG0725 Reductases with broad range of substrate specificities, at 225,398 to 226,777 10166
Group Condition mRNA_1794 mRNA_1795 mRNA_1796 mRNA_1797 mRNA_1798
10162 10163 10164 10165 10166
growth on oleic acid YNB Oleic Acid -1.4 N.D. -0.5 -0.4 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 N.D. -0.6 -0.6 -0.3
auxotrophy Dropout Complete -0.1 N.D. -0.7 -0.3 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. -0.6 -0.5 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. -0.9 -0.1 -0.2
growth on oleic acid YNB Glucose -0.2 N.D. -1.0 -0.0 +0.0
growth on ricinoleic acid YNB Glucose -0.0 N.D. -0.7 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. -0.6 -0.2 -0.2
auxotrophy YNB Glucose +0.2 N.D. -0.4 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. +0.0 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. -0.5 +0.5 -0.3
growth on ypd YPD +0.2 N.D. +0.2 +0.2 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. -0.2 +0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. -0.0 +0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. +0.2 +0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -0.2 +0.4 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. +0.3 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. +0.9 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 N.D. +0.2 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. +1.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 N.D. +0.7 +0.1 +0.1
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