Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10164 and 10165 are separated by 110 nucleotides
10165 and 10166 are separated by 513 nucleotides
10166 and 10167 are separated by 149 nucleotides
10167 and 10168 are separated by 149 nucleotides
mRNA_1796: 10164 - K10878 SPO11 meiotic recombination protein SPO11, at 219,619 to 222,270
10164
mRNA_1797: 10165 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 222,381 to 224,884
10165
mRNA_1798: 10166 - KOG0725 Reductases with broad range of substrate specificities, at 225,398 to 226,777
10166
mRNA_1799: 10167 - KOG2489 Transmembrane protein, at 226,927 to 229,515
10167
mRNA_1800: 10168 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 229,665 to 231,047
10168
Group
Condition
mRNA
_1796
mRNA
_1797
mRNA
_1798
mRNA
_1799
mRNA
_1800
10164
10165
10166
10167
10168
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.6
-0.3
-0.3
+0.2
auxotrophy
Dropout Complete
-0.7
-0.3
-0.6
-0.2
+0.0
growth on oleic acid
YNB Glucose
-1.0
-0.0
+0.0
-0.4
-0.1
growth on oleic acid
YNB Oleic Acid
-0.5
-0.4
+0.0
-0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
-0.5
-0.1
-0.4
+0.3
growth on ricinoleic acid
YNB Glucose
-0.7
-0.3
-0.1
-0.2
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.9
-0.1
-0.2
-0.1
+0.1
auxotrophy
YNB Glucose
-0.4
-0.1
-0.2
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.6
-0.2
-0.2
+0.0
+0.3
growth on ypd
YPD
+0.2
+0.2
-0.4
+0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.3
-0.1
-0.1
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
+0.1
-0.1
-0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
+0.5
-0.3
+0.3
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.3
-0.1
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.9
+0.0
-0.1
-0.2
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.2
+0.2
-0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.0
+0.1
+0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.4
+0.3
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.1
+0.4
-0.2
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.0
-0.1
-0.1
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.7
+0.1
+0.1
-0.1
-0.0
remove
mRNA_1796
plot
remove
mRNA_1797
plot
remove
mRNA_1798
remove
mRNA_1799
plot
remove
mRNA_1800
plot