Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10165 and 10166 are separated by 513 nucleotides10166 and 10167 are separated by 149 nucleotides10167 and 10168 are separated by 149 nucleotides10168 and 10169 are separated by 137 nucleotides mRNA_1797: 10165 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 222,381 to 224,884 10165 mRNA_1798: 10166 - KOG0725 Reductases with broad range of substrate specificities, at 225,398 to 226,777 10166 mRNA_1799: 10167 - KOG2489 Transmembrane protein, at 226,927 to 229,515 10167 mRNA_1800: 10168 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 229,665 to 231,047 10168 mRNA_1801: 10169 - HMMPfam-Survival motor neuron (SMN) interacting protein 1 (SIP1)-PF04938, at 231,185 to 232,547 10169
Group Condition mRNA_1797 mRNA_1798 mRNA_1799 mRNA_1800 mRNA_1801
10165 10166 10167 10168 10169
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.3 -0.3 +0.2 N.D.
auxotrophy Dropout Complete -0.3 -0.6 -0.2 +0.0 N.D.
growth on oleic acid YNB Oleic Acid -0.4 +0.0 -0.3 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.1 -0.4 +0.3 N.D.
growth on ricinoleic acid YNB Glucose -0.3 -0.1 -0.2 +0.0 N.D.
growth on oleic acid YNB Glucose -0.0 +0.0 -0.4 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.1 -0.2 -0.3 N.D.
auxotrophy YNB Glucose -0.1 -0.2 -0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 -0.2 +0.0 N.D.
growth on ypd YPD +0.2 -0.4 +0.1 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.1 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.1 -0.1 -0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.1 -0.3 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 +0.0 +0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.1 -0.1 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 -0.1 -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.1 +0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.4 -0.2 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.2 -0.1 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.3 +0.3 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.3 -0.1 +0.2 N.D.
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