Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10167 and 10168 are separated by 149 nucleotides10168 and 10169 are separated by 137 nucleotides10169 and 10170 are separated by 74 nucleotides10170 and 10171 are separated by 292 nucleotides mRNA_1799: 10167 - KOG2489 Transmembrane protein, at 226,927 to 229,515 10167 mRNA_1800: 10168 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 229,665 to 231,047 10168 mRNA_1801: 10169 - HMMPfam-Survival motor neuron (SMN) interacting protein 1 (SIP1)-PF04938, at 231,185 to 232,547 10169 mRNA_1802: 10170 - K05546 GANAB alpha 1,3-glucosidase, at 232,622 to 238,014 10170 mRNA_1803: 10171 - K15205 TFC6 transcription factor C subunit 6, at 238,307 to 241,610 10171
Group Condition mRNA_1799 mRNA_1800 mRNA_1801 mRNA_1802 mRNA_1803
10167 10168 10169 10170 10171
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.3 N.D. -1.1 N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.0 N.D. -0.9 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.3 N.D. -0.6 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.2 N.D. -0.8 N.D.
auxotrophy YNB Glucose -0.2 +0.1 N.D. -0.8 N.D.
auxotrophy Dropout Complete -0.2 +0.0 N.D. -0.7 N.D.
growth on oleic acid YNB Glucose -0.4 -0.1 N.D. -0.3 N.D.
growth on oleic acid YNB Oleic Acid -0.3 -0.2 N.D. -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.0 N.D. -0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 N.D. -0.6 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 N.D. -0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 N.D. -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.3 N.D. -0.6 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.3 N.D. -0.1 N.D.
growth on ypd YPD +0.1 -0.2 N.D. +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 N.D. -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.0 N.D. +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.1 N.D. +0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 N.D. +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 N.D. +0.7 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.1 N.D. +0.8 N.D.
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