Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10170 and 10171 are separated by 292 nucleotides
10171 and 10172 are separated by 177 nucleotides
10172 and 10173 are separated by 910 nucleotides
10173 and 10174 are separated by 589 nucleotides
mRNA_1802: 10170 - K05546 GANAB alpha 1,3-glucosidase, at 232,622 to 238,014
10170
mRNA_1803: 10171 - K15205 TFC6 transcription factor C subunit 6, at 238,307 to 241,610
10171
mRNA_1804: 10172 - Hypothetical Protein, at 241,788 to 243,277
10172
mRNA_1805: 10173 - K00616 E2.2.1.2, talA, talB transaldolase, at 244,188 to 245,888
10173
mRNA_1806: 10174 - BLAST related to C2H2 zinc finger protein [Ustilago hordei], at 246,478 to 247,533
10174
Group
Condition
mRNA
_1802
mRNA
_1803
mRNA
_1804
mRNA
_1805
mRNA
_1806
10170
10171
10172
10173
10174
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
N.D.
-0.3
N.D.
-0.9
auxotrophy
YNB Glucose
-0.8
N.D.
-0.7
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.8
N.D.
-1.4
N.D.
-0.7
auxotrophy
Dropout Complete
-0.7
N.D.
-1.2
N.D.
+0.9
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
-0.1
N.D.
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
N.D.
+0.3
N.D.
-0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.6
N.D.
-1.1
N.D.
+1.1
auxotrophy
YNB Glucose 75mM Arginine
-0.6
N.D.
-0.9
N.D.
+0.9
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.1
N.D.
-0.7
N.D.
+1.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
N.D.
+0.0
N.D.
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.8
N.D.
+0.4
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
N.D.
+0.2
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
N.D.
+0.9
N.D.
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
N.D.
+0.1
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
N.D.
+0.4
N.D.
-0.4
growth on oleic acid
YNB Glucose
-0.3
N.D.
-0.2
N.D.
+0.7
growth on ricinoleic acid
YNB Glucose
-0.9
N.D.
+0.5
N.D.
+0.9
ypd buoyancy
40 hrs Low Buoyancy
+0.7
N.D.
-0.1
N.D.
-0.1
growth on oleic acid
YNB Oleic Acid
-0.3
N.D.
+0.7
N.D.
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
N.D.
-0.3
N.D.
+1.0
growth on ypd
YPD
+0.1
N.D.
+1.6
N.D.
+0.1
remove
mRNA_1802
plot
remove
mRNA_1803
plot
remove
mRNA_1804
remove
mRNA_1805
plot
remove
mRNA_1806
plot