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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10175 and 10176 are separated by 2124 nucleotides
10176 and 10177 are separated by 777 nucleotides
10177 and 10178 are separated by 457 nucleotides
10178 and 10179 are separated by 359 nucleotides
mRNA_1807: 10175 - K09403 FOXJ2_3 forkhead box protein J2/3, at 251,136 to 255,270
10175
mRNA_1808: 10176 - Hypothetical Protein, at 257,395 to 258,066
10176
mRNA_1809: 10177 - Hypothetical Protein, at 258,844 to 259,797
10177
mRNA_1810: 10178 - HMMPfam-Predicted SAM-dependent RNA methyltransferase-PF04252, at 260,255 to 261,213
10178
mRNA_1811: 10179 - HMMPfam-Centrosome microtubule-binding domain of Cep57-PF06657, at 261,573 to 264,889
10179
Group
Condition
mRNA
_1807
mRNA
_1808
mRNA
_1809
mRNA
_1810
mRNA
_1811
10175
10176
10177
10178
10179
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.8
N.D.
+0.3
-0.8
growth on oleic acid
YNB Glucose
-0.3
-0.6
N.D.
-0.1
-0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.3
N.D.
-0.1
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.2
N.D.
-0.0
-0.5
growth on oleic acid
YNB Oleic Acid
-0.2
-0.1
N.D.
-0.3
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.0
N.D.
+0.1
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.6
N.D.
-0.3
-0.8
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.2
N.D.
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.7
N.D.
-0.4
-0.7
growth on ypd
YPD
-0.2
-0.5
N.D.
-0.1
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.8
N.D.
-0.1
-0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.0
N.D.
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.1
N.D.
+0.3
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.1
N.D.
+0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.5
N.D.
-0.5
+0.3
auxotrophy
YNB Glucose
-0.1
-0.2
N.D.
+0.2
+0.8
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.6
N.D.
+0.1
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+1.1
N.D.
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+1.2
N.D.
-0.2
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.2
N.D.
-0.0
+0.6
auxotrophy
Dropout Complete
-0.2
+0.4
N.D.
+0.2
+0.4
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