Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10176 and 10177 are separated by 777 nucleotides
10177 and 10178 are separated by 457 nucleotides
10178 and 10179 are separated by 359 nucleotides
10179 and 10180 are separated by 262 nucleotides
mRNA_1808: 10176 - Hypothetical Protein, at 257,395 to 258,066
10176
mRNA_1809: 10177 - Hypothetical Protein, at 258,844 to 259,797
10177
mRNA_1810: 10178 - HMMPfam-Predicted SAM-dependent RNA methyltransferase-PF04252, at 260,255 to 261,213
10178
mRNA_1811: 10179 - HMMPfam-Centrosome microtubule-binding domain of Cep57-PF06657, at 261,573 to 264,889
10179
mRNA_1812: 10180 - Hypothetical Protein, at 265,152 to 268,202
10180
Group
Condition
mRNA
_1808
mRNA
_1809
mRNA
_1810
mRNA
_1811
mRNA
_1812
10176
10177
10178
10179
10180
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
N.D.
+0.3
-0.8
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
N.D.
-0.0
-0.5
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
N.D.
-0.3
-0.1
-0.3
growth on oleic acid
YNB Glucose
-0.6
N.D.
-0.1
-0.2
+0.1
growth on ricinoleic acid
YNB Glucose
-0.3
N.D.
-0.1
-0.5
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
N.D.
+0.1
-0.5
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
N.D.
-0.3
-0.8
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.2
N.D.
-0.1
-0.5
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.7
N.D.
-0.4
-0.7
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
N.D.
-0.1
+0.0
-0.0
growth on ypd
YPD
-0.5
N.D.
-0.1
+0.6
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.8
N.D.
-0.1
-0.9
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
+0.2
-0.0
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
N.D.
+0.3
+0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
N.D.
-0.5
+0.3
-0.0
auxotrophy
YNB Glucose
-0.2
N.D.
+0.2
+0.8
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.6
N.D.
+0.1
+0.3
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+1.2
N.D.
-0.2
-0.4
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
N.D.
-0.0
+0.6
-0.0
auxotrophy
Dropout Complete
+0.4
N.D.
+0.2
+0.4
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+1.1
N.D.
-0.3
+0.2
-0.1
remove
mRNA_1808
plot
remove
mRNA_1809
plot
remove
mRNA_1810
remove
mRNA_1811
plot
remove
mRNA_1812
plot