Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10176 and 10177 are separated by 777 nucleotides10177 and 10178 are separated by 457 nucleotides10178 and 10179 are separated by 359 nucleotides10179 and 10180 are separated by 262 nucleotides mRNA_1808: 10176 - Hypothetical Protein, at 257,395 to 258,066 10176 mRNA_1809: 10177 - Hypothetical Protein, at 258,844 to 259,797 10177 mRNA_1810: 10178 - HMMPfam-Predicted SAM-dependent RNA methyltransferase-PF04252, at 260,255 to 261,213 10178 mRNA_1811: 10179 - HMMPfam-Centrosome microtubule-binding domain of Cep57-PF06657, at 261,573 to 264,889 10179 mRNA_1812: 10180 - Hypothetical Protein, at 265,152 to 268,202 10180
Group Condition mRNA_1808 mRNA_1809 mRNA_1810 mRNA_1811 mRNA_1812
10176 10177 10178 10179 10180
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 N.D. +0.3 -0.8 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.0 -0.5 -0.2
growth on oleic acid YNB Oleic Acid -0.1 N.D. -0.3 -0.1 -0.3
growth on oleic acid YNB Glucose -0.6 N.D. -0.1 -0.2 +0.1
growth on ricinoleic acid YNB Glucose -0.3 N.D. -0.1 -0.5 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 N.D. +0.1 -0.5 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 N.D. -0.3 -0.8 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. -0.1 -0.5 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 N.D. -0.4 -0.7 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. -0.1 +0.0 -0.0
growth on ypd YPD -0.5 N.D. -0.1 +0.6 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 N.D. -0.1 -0.9 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.2 -0.0 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. +0.3 +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.5 N.D. -0.5 +0.3 -0.0
auxotrophy YNB Glucose -0.2 N.D. +0.2 +0.8 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.6 N.D. +0.1 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.2 N.D. -0.2 -0.4 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. -0.0 +0.6 -0.0
auxotrophy Dropout Complete +0.4 N.D. +0.2 +0.4 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +1.1 N.D. -0.3 +0.2 -0.1
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